Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL670379.7-201ENST00000605823 252 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL355802.3-201ENST00000607571 545 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 MIR7851-201ENST00000610611 160 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 U7.8-201ENST00000619968 63 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL589994.2-201ENST00000621124 579 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 DDX10P1-201ENST00000448545 1933 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-263P-201ENST00000363811 107 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 RNA5SP235-201ENST00000365411 114 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 DEFB109C-201ENST00000382575 264 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 DEFB109B-201ENST00000382656 264 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.445-201ENST00000384168 102 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-550P-201ENST00000391057 101 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 MTCYBP4-201ENST00000401524 249 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-1304P-201ENST00000411374 106 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 POLHP1-201ENST00000411806 470 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 RPL37P10-201ENST00000412884 288 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 CALM2P2-201ENST00000428512 440 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC005019.1-201ENST00000436455 431 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC008481.1-201ENST00000463278 396 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC074250.1-201ENST00000511117 192 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC026801.2-201ENST00000515352 425 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-566P-201ENST00000516790 107 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC090136.1-201ENST00000520009 240 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 MIR4790-201ENST00000577799 79 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 SNRPGP17-201ENST00000603780 214 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC012468.1-201ENST00000604888 430 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 AC007179.3-201ENST00000604976 235 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 MIR8058-201ENST00000615737 89 ntBASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTDP1Q9Y5B0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 SNORD9-201ENST00000362566 104 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RNA5SP322-201ENST00000363617 119 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 SNORA63C-201ENST00000364578 129 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-1160P-201ENST00000384546 104 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 MIR183-201ENST00000384958 110 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RNU4-78P-201ENST00000410940 126 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-370P-201ENST00000411008 104 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 AL139396.1-201ENST00000421137 167 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 GPM6BP2-201ENST00000432046 144 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RPL23AP83-201ENST00000434984 473 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 GPM6BP1-201ENST00000446387 144 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 AL162389.1-201ENST00000449233 177 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 TRBVA-201ENST00000498804 316 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RN7SKP24-201ENST00000515888 284 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 AC124303.1-201ENST00000605703 360 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 AC007823.1-201ENST00000569932 1566 ntBASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.22□□□□□ -1.73
CTDP1Q9Y5B0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CTDP1Q9Y5B0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.21□□□□□ -1.73
CTDP1Q9Y5B0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 RNU6-946P-201ENST00000383878 107 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 EIF4E2P1-201ENST00000393781 255 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 RN7SKP158-201ENST00000410453 326 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 AL137014.1-201ENST00000420490 1226 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 Z82205.1-201ENST00000428456 297 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 MTCO3P45-201ENST00000443036 613 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 RPS3AP12-201ENST00000443616 753 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 SCARNA18-201ENST00000459004 134 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 RPL21P10-201ENST00000463521 490 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 AL163540.1-201ENST00000485382 386 ntBASIC4.21□□□□□ -1.74
CTDP1Q9Y5B0 RPL32P34-201ENST00000486380 400 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms