Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AC090740.1-201ENST00000623193 2262 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 Y_RNA.86-201ENST00000363020 111 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 U3.12-201ENST00000364498 214 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 SNORA14A-201ENST00000364773 135 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 SNORA11-201ENST00000408789 128 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RNU2-41P-201ENST00000410991 178 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RN7SKP140-201ENST00000411196 284 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC092809.3-201ENST00000415453 231 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC245054.2-201ENST00000415639 319 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC091390.3-201ENST00000426478 338 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 SNRPEP8-201ENST00000442866 260 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AL121871.1-201ENST00000443413 436 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RPL21P23-201ENST00000446654 460 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RPL23AP31-201ENST00000456160 467 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 PMCHL2-203ENST00000457791 237 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC104472.2-201ENST00000469035 601 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 MLLT10P2-201ENST00000506434 249 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RNU6-875P-201ENST00000516488 106 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 CENPUP1-201ENST00000526649 1202 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 MIR4429-201ENST00000580105 73 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 MIR4276-201ENST00000584832 70 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC018638.8-201ENST00000588755 281 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 NRBF2P5-201ENST00000603087 788 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 BNIP3P10-201ENST00000605360 577 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 RNU6-89P-201ENST00000606519 100 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 MIR92B-201ENST00000607575 96 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC004832.5-201ENST00000608677 401 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC019176.2-201ENST00000611579 315 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC104260.1-201ENST00000616660 539 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AL589994.2-201ENST00000621124 579 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC007998.5-201ENST00000622938 237 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 OR4G1P-203ENST00000641984 1631 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 AC092435.3-201ENST00000565538 3654 ntBASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.77□□□□□ -1.97
MRPS28Q9Y2Q9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 DEFB108F-201ENST00000344638 222 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 Y_RNA.157-201ENST00000363638 102 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 MIR514A1-201ENST00000385133 98 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 MIR670-201ENST00000390142 98 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 RNU6-550P-201ENST00000391057 101 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 RNU6-332P-201ENST00000391193 108 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 RPL21P3-201ENST00000395517 478 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 NDUFB4P5-201ENST00000415445 361 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC009969.1-201ENST00000438726 172 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 UQCRHP3-201ENST00000451503 251 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC146507.2-201ENST00000460608 476 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 RNA5SP503-201ENST00000517047 117 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 OR5B10P-201ENST00000532869 642 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC023050.3-201ENST00000541142 333 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC078814.3-201ENST00000553036 491 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC174048.1-201ENST00000603389 144 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC012409.4-201ENST00000612923 249 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC084757.4-201ENST00000616350 526 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AC090617.10-201ENST00000624308 134 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 MTND5P42-201ENST00000637720 498 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 SDAD1P2-201ENST00000441308 2028 ntBASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MRPS28Q9Y2Q9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MRPS28Q9Y2Q9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms