Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AL163973.1-201ENST00000484753 577 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 VN1R104P-201ENST00000505115 1009 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC092436.1-201ENST00000506450 503 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 NRON-201ENST00000517270 370 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AP005435.4-201ENST00000529514 284 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AL451007.1-201ENST00000595491 289 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AP001330.4-201ENST00000604350 154 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AL033523.1-201ENST00000605153 153 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC007619.2-201ENST00000605743 379 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC093732.2-201ENST00000607950 274 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC010133.1-201ENST00000615809 842 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC010338.1-201ENST00000621823 717 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC025034.2-201ENST00000623264 286 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC000403.1-201ENST00000613696 3585 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AP003122.5-201ENST00000527668 3766 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNU6-179P-201ENST00000363350 107 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNU6-61P-201ENST00000365528 109 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNU6-946P-201ENST00000383878 107 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 MT-TL1-201ENST00000386347 75 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC138393.2-201ENST00000414742 246 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RPS15AP6-201ENST00000420703 385 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC008850.1-201ENST00000427546 362 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNU7-182P-201ENST00000459009 62 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RN7SL75P-201ENST00000461926 281 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 GMFBP1-201ENST00000467831 427 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 HSPE1P6-201ENST00000479457 291 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RN7SL633P-201ENST00000488974 297 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC108078.2-201ENST00000510750 236 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RNA5SP468-201ENST00000516782 93 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 RN7SKP219-201ENST00000516825 296 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 SNORA20.3-201ENST00000516880 132 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 SUB1P1-201ENST00000524415 382 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AP006587.4-201ENST00000526053 529 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.6-201ENST00000603753 252 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.11-201ENST00000604059 253 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AC008162.1-201ENST00000604718 254 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.1-201ENST00000604752 252 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.5-201ENST00000605253 252 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.12-201ENST00000605291 253 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.8-201ENST00000605353 252 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL670379.7-201ENST00000605823 252 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AL008636.1-201ENST00000625038 1018 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 MIR4275-201ENST00000636486 87 ntBASIC3.16□□□□□ -1.9
SIX4Q9UIU6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX4Q9UIU6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.15□□□□□ -1.9
SIX4Q9UIU6 MTND5P17-201ENST00000418405 1603 ntBASIC3.15□□□□□ -1.9
SIX4Q9UIU6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.15□□□□□ -1.9
SIX4Q9UIU6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SIX4Q9UIU6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 SNORA72.1-201ENST00000363485 129 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AL356776.1-201ENST00000406574 447 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 RPL5P18-201ENST00000406671 891 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 RPL36AP6-201ENST00000435770 321 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AC020550.1-201ENST00000447385 163 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AL118520.1-201ENST00000450770 291 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 snoU13.4-201ENST00000458916 104 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AL049874.1-201ENST00000489560 388 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 EIF4EP3-201ENST00000498782 656 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 MTCYBP18-201ENST00000501056 747 ntBASIC3.15□□□□□ -1.91
SIX4Q9UIU6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX4Q9UIU6 AC098799.2-201ENST00000509466 868 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms