Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TXNP7-201ENST00000406296 293 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AL513331.1-201ENST00000411908 397 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AL451054.2-201ENST00000420896 202 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 TPT1P14-201ENST00000448018 505 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 RPL23AP35-201ENST00000451906 501 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 RPS15AP34-201ENST00000487776 387 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC106872.3-201ENST00000495104 446 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 LTV1P1-201ENST00000510683 1237 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC068587.4-201ENST00000533893 186 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC060771.1-201ENST00000582031 164 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 MIR3611-201ENST00000584484 83 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC068944.2-201ENST00000610373 403 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC010133.1-201ENST00000615809 842 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC092192.1-201ENST00000633154 1018 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC069528.2-201ENST00000624849 1991 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 ELF2P3-201ENST00000445099 1506 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC027514.1-201ENST00000588561 1603 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 AC080100.1-201ENST00000624239 5356 ntBASIC2.86□□□□□ -1.95
CLIP2Q9UDT6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RNU4-21P-201ENST00000362802 126 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RNU6-433P-201ENST00000363216 104 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 U3.4-201ENST00000363352 213 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RNU1-39P-201ENST00000383897 165 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RNU6-217P-201ENST00000384164 104 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 Y_RNA.517-201ENST00000384551 106 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AL109755.1-201ENST00000401791 649 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AL031577.2-201ENST00000404133 280 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RNU2-33P-201ENST00000410344 192 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RN7SKP140-201ENST00000411196 284 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 MTCO2P34-201ENST00000421994 607 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 MTND4P18-201ENST00000447010 465 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 KATNBL1P6-201ENST00000453433 915 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 TPT1P7-201ENST00000458300 517 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 SRRM1P2-201ENST00000464531 1192 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 SNORA31.11-201ENST00000516528 139 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 RNA5SP471-201ENST00000516971 106 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 MTND1P15-201ENST00000579262 949 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 MTATP6P3-201ENST00000581686 676 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC239868.4-201ENST00000608318 671 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC046143.2-201ENST00000609789 160 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 SDR42E1P2-201ENST00000614861 481 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC034102.8-201ENST00000615146 484 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 AC116165.2-201ENST00000616705 206 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 MTND1P37-201ENST00000636562 264 ntBASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLIP2Q9UDT6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC004944.1-201ENST00000517807 3059 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 SNORA67.1-201ENST00000364749 141 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 RN7SKP142-201ENST00000411236 328 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AL359704.1-201ENST00000411586 781 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC022028.1-201ENST00000412054 408 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC099548.1-201ENST00000421443 426 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AL358075.3-201ENST00000426289 226 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AL445669.1-201ENST00000426743 755 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AL049734.2-201ENST00000441066 616 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 MTCO3P45-201ENST00000443036 613 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AP1S2P1-201ENST00000457344 379 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC234781.5-201ENST00000508429 271 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC079140.3-201ENST00000511111 550 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 RNU6-720P-201ENST00000516363 108 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 RNA5SP291-201ENST00000517222 105 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 ATP5F1P5-201ENST00000526403 760 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AP002770.2-201ENST00000543613 532 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 MIR4801-201ENST00000582704 82 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms