Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 GNAI2P1-201ENST00000541815 315 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC027807.1-201ENST00000559921 996 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 BNIP3P25-201ENST00000596023 559 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 BNIP3P23-201ENST00000599655 511 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 SEPT7P9-203ENST00000604116 343 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 RN7SL853P-201ENST00000617250 223 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC009268.2-201ENST00000621925 457 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC109454.4-201ENST00000623411 649 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC120349.2-201ENST00000625002 298 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC019226.1-201ENST00000625666 515 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 RNU6-359P-201ENST00000365466 108 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 RPL22P22-201ENST00000395439 379 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC117503.1-201ENST00000472241 394 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 RPL36AP48-201ENST00000485521 314 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC034114.1-201ENST00000520293 285 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC022784.5-201ENST00000522241 437 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 DUXAP5-201ENST00000529668 529 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC022880.1-201ENST00000534017 973 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC122134.1-202ENST00000569111 1201 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AL158827.2-201ENST00000602494 330 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC126118.1-201ENST00000607744 628 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 DUSP12P1-201ENST00000612874 516 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC243773.3-201ENST00000613270 256 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 TUG1_2.1-201ENST00000614234 87 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AL691447.3-201ENST00000635020 330 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 LINC02211-204ENST00000642024 1070 ntBASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS29Q9UBQ0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 U8.3-201ENST00000363321 132 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 RNU6-658P-201ENST00000384606 106 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 MIR95-201ENST00000385072 81 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC007098.1-201ENST00000420122 367 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 SEPT7P5-201ENST00000434048 306 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 MTND2P30-201ENST00000456663 382 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 RNU6-970P-201ENST00000516312 107 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 SNORA48.11-201ENST00000517015 89 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC026271.5-201ENST00000577873 130 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC073544.2-201ENST00000601155 540 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AC025811.1-201ENST00000604312 472 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 AP005229.2-201ENST00000609980 697 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 MIR8084-201ENST00000614105 89 ntBASIC1.43□□□□□ -2.18
VPS29Q9UBQ0 RNU6-97P-201ENST00000363387 104 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 MIR561-201ENST00000385216 97 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 RNU6-754P-201ENST00000391166 107 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AL590084.2-201ENST00000401481 382 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 MIR1302-8-201ENST00000408342 128 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC078974.1-201ENST00000411597 223 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AL449283.1-202ENST00000418249 604 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AL513185.2-201ENST00000425543 193 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC010095.1-201ENST00000443543 144 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 MTND1P9-201ENST00000453775 944 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 BX322784.1-201ENST00000455793 1077 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AL441985.1-201ENST00000457727 251 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 RNU6-775P-201ENST00000459318 96 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC140059.1-201ENST00000489238 361 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 MTND5P13-201ENST00000513046 1079 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 RNU6-927P-201ENST00000516199 100 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 RNU6-751P-201ENST00000516382 101 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 MRPS36P5-201ENST00000551909 298 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 MIR4713-201ENST00000582691 75 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AF038458.1-201ENST00000588406 262 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC005332.6-201ENST00000613178 446 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AL157770.1-201ENST00000623049 439 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AL118508.4-201ENST00000624142 1176 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AP005901.5-201ENST00000545779 1796 ntBASIC1.42□□□□□ -2.18
VPS29Q9UBQ0 AC107982.1-201ENST00000507171 1300 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms