Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AL121601.2-201ENST00000438019 707 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC006028.1-201ENST00000438379 402 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 SCARNA18-201ENST00000459004 134 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 RNU6-333P-201ENST00000459117 107 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 CENPBD1P1-201ENST00000464061 469 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 RPL7P5-201ENST00000471472 736 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC109925.1-201ENST00000478069 331 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC104136.1-201ENST00000512969 394 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 MIR5692A1-201ENST00000580523 69 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 uc_338.1-201ENST00000612113 180 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL20A1Q9P218 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL20A1Q9P218 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL20A1Q9P218 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC118273.1-201ENST00000525324 3006 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL20A1Q9P218 MIR30E-201ENST00000362104 92 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 Y_RNA.72-201ENST00000362894 103 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 Y_RNA.160-201ENST00000363677 92 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 RNU6-82P-201ENST00000363970 107 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL20A1Q9P218 RNU4-26P-201ENST00000410270 107 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 UBE2D3P2-201ENST00000424409 445 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AL513185.2-201ENST00000425543 193 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AL512844.2-201ENST00000433990 593 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC092573.2-201ENST00000434546 243 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 RN7SL863P-201ENST00000462370 296 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 RPL23AP67-201ENST00000465341 474 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 IGKV2-23-201ENST00000518729 323 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 PSMA2P1-201ENST00000526365 646 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC078814.3-201ENST00000553036 491 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 RNU6-89P-201ENST00000606519 100 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AL355073.2-201ENST00000612106 557 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 SNORD39.4-201ENST00000620099 78 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 ZNF807-201ENST00000328088 1707 ntBASIC3.69□□□□□ -1.82
COL20A1Q9P218 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL20A1Q9P218 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL20A1Q9P218 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.69□□□□□ -1.82
COL20A1Q9P218 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 AL353743.1-202ENST00000431724 1695 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 NDUFB4P4-201ENST00000404822 243 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 AL353678.1-201ENST00000422735 741 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AC092047.1-201ENST00000424997 240 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 RPL23AP69-201ENST00000431134 458 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 SNRPEP4-201ENST00000435815 279 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 RPS24P13-201ENST00000442520 397 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 MRPS31P2-201ENST00000451581 518 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 FABP5P15-201ENST00000453566 214 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AC012181.1-201ENST00000479895 423 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AC021205.2-201ENST00000480069 347 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 MTCYBP18-201ENST00000501056 747 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 HMGB3P15-201ENST00000507326 574 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 SNORA20.3-201ENST00000516880 132 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 RNU6-1315P-201ENST00000517187 99 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 CENPUP1-201ENST00000526649 1202 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 MIR1273C-201ENST00000578669 77 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 MIR3941-201ENST00000582572 103 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 MIR4325-201ENST00000583049 90 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AC018638.8-201ENST00000588755 281 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AL035413.2-201ENST00000604801 525 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 AC027309.3-201ENST00000623419 351 ntBASIC3.68□□□□□ -1.82
COL20A1Q9P218 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms