Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SRP72P2-201ENST00000344851 1979 ntBASIC3.42□□□□□ -1.86
NCKIPSDQ9NZQ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC090740.1-201ENST00000623193 2262 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RNU6-641P-201ENST00000384006 107 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RNU6-116P-201ENST00000384042 109 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RNU6-701P-201ENST00000384059 107 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RNU6-1148P-201ENST00000410992 104 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AL513331.1-201ENST00000411908 397 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 BX323014.1-201ENST00000412876 237 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC020550.1-201ENST00000447385 163 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC008155.2-201ENST00000464337 397 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC126389.1-201ENST00000477436 290 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC092185.1-201ENST00000491371 97 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC116562.3-201ENST00000506136 177 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RN7SKP219-201ENST00000516825 296 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 PSMA2P1-201ENST00000526365 646 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC068587.5-201ENST00000528506 175 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC004024.1-201ENST00000549244 247 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 MIR4775-201ENST00000581168 75 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AL589994.2-201ENST00000621124 579 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 AC004972.1-201ENST00000623934 2209 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 MTND5P27-201ENST00000428871 1720 ntBASIC3.41□□□□□ -1.86
NCKIPSDQ9NZQ3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NCKIPSDQ9NZQ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
NCKIPSDQ9NZQ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 FAT1P1-201ENST00000406588 507 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU2-39P-201ENST00000410604 198 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC114491.1-201ENST00000416095 246 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC092573.2-201ENST00000434546 243 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 Z83843.1-201ENST00000604070 3685 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 YPEL5P2-201ENST00000605553 359 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC090132.2-201ENST00000615881 347 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
NCKIPSDQ9NZQ3 AP001148.1-201ENST00000624124 2359 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AL139276.1-201ENST00000311910 1001 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC073343.1-201ENST00000328239 651 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 Y_RNA.72-201ENST00000362894 103 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 SNORA24.1-201ENST00000384401 135 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 Y_RNA.535-201ENST00000384612 99 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 RPS20P15-201ENST00000412792 311 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 PDCL2P1-201ENST00000419302 352 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 SRIP2-201ENST00000428470 166 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC007919.1-201ENST00000429380 217 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 HMGB1P27-201ENST00000431429 603 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC008264.1-201ENST00000447612 367 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC125238.1-201ENST00000448842 249 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AL118520.1-201ENST00000450770 291 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms