Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 AL365361.1-201ENST00000566942 3481 ntBASIC1.91□□□□□ -2.1
CLN6Q9NWW5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
CLN6Q9NWW5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
CLN6Q9NWW5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
CLN6Q9NWW5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.9□□□□□ -2.1
CLN6Q9NWW5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RNU1-91P-201ENST00000364746 163 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 SNORA70.4-201ENST00000365509 134 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RNA5SP88-201ENST00000365560 109 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RNU6-748P-201ENST00000384648 107 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RNU6-906P-201ENST00000384700 70 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 MIR1302-8-201ENST00000408342 128 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RNA5SP270-201ENST00000411361 118 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC093106.2-201ENST00000428212 385 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC004383.1-201ENST00000438135 289 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC004924.1-201ENST00000480160 781 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RPL36AP48-201ENST00000485521 314 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AF213884.2-201ENST00000510417 903 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 MRPS33P3-201ENST00000513456 322 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 SNORA25.11-201ENST00000515935 105 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 RNA5SP281-201ENST00000516504 135 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 MIR4782-201ENST00000577987 79 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 BNIP3P9-201ENST00000603714 553 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AL138963.2-201ENST00000605137 226 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC025034.2-201ENST00000623264 286 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 Z75746.1-201ENST00000440243 2080 ntBASIC1.9□□□□□ -2.11
CLN6Q9NWW5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.9□□□□□ -2.11
CLN6Q9NWW5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNU6-525P-201ENST00000363685 104 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNU6-288P-201ENST00000363690 104 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNU6-188P-201ENST00000364207 107 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNA5SP387-201ENST00000364226 106 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 Y_RNA.333-201ENST00000365274 102 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNU1-148P-201ENST00000384472 162 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNU6-817P-201ENST00000391083 104 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RPS4XP8-201ENST00000402039 771 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RNU2-63P-201ENST00000410792 194 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 ELOCP17-201ENST00000414751 326 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RAC1P6-201ENST00000423911 575 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 TIMM9P1-201ENST00000436122 256 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RPL7P12-201ENST00000446719 750 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AL049829.1-201ENST00000465411 156 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 CKS1BP2-201ENST00000497342 240 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC105185.1-201ENST00000518705 535 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 RPS3AP4-201ENST00000555161 764 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 MIR3200-201ENST00000580767 85 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC025165.5-201ENST00000602802 578 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 APOOP1-201ENST00000604695 592 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC068276.1-201ENST00000605793 379 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC106052.1-201ENST00000608029 497 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 U4atac.1-201ENST00000618345 95 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 AC103706.2-201ENST00000638080 240 ntBASIC1.89□□□□□ -2.11
CLN6Q9NWW5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CLN6Q9NWW5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 SNORA5B-201ENST00000363786 132 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 U3.12-201ENST00000364498 214 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 RNU6-1280P-201ENST00000365211 107 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 RNU6-14P-201ENST00000384630 106 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 NDUFB4P4-201ENST00000404822 243 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 OR51A5P-201ENST00000415429 942 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC097463.2-201ENST00000421074 142 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms