Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC236972.1-201ENST00000433225 199 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 RPL36AP6-201ENST00000435770 321 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 RPL23AP58-201ENST00000440453 469 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 CACYBPP2-201ENST00000453625 678 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 RNU6-956P-201ENST00000458868 103 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC007182.2-201ENST00000489251 402 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AL355598.1-201ENST00000604169 202 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC087752.4-201ENST00000605911 462 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC010678.1-201ENST00000614118 713 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AC008250.2-201ENST00000615261 205 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AL589994.2-201ENST00000621124 579 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 PISRT1-201ENST00000626175 531 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 FARSBP1-201ENST00000435808 1778 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 RPS12P24-201ENST00000412619 387 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 ELOCP4-201ENST00000420090 333 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 MTCO2P34-201ENST00000421994 607 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AL353706.1-201ENST00000436728 494 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 RPS24P1-201ENST00000438550 371 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 WASF1P1-201ENST00000447560 1131 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 GAPDHP17-201ENST00000449858 1001 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 MTATP6P7-201ENST00000453315 681 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 SNORD109B-201ENST00000458961 67 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 SNORD109A-201ENST00000459128 67 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 RPL9P33-201ENST00000484311 566 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 SUMO2P6-201ENST00000505273 288 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC009901.1-201ENST00000506703 541 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 RNU6-677P-201ENST00000516914 101 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 NACAP3-201ENST00000552100 481 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC025281.1-201ENST00000567026 265 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 MIR3913-1-201ENST00000577744 102 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 NRBF2P1-201ENST00000587407 859 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC040904.1-201ENST00000590850 223 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC023043.3-201ENST00000593113 385 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC020895.1-201ENST00000595362 272 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 AC110491.1-201ENST00000562191 2010 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 ELF2P3-201ENST00000445099 1506 ntBASIC3.39□□□□□ -1.87
SMC4Q9NTJ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 SNORA5B-201ENST00000363786 132 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RNY4P34-201ENST00000364779 95 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 Y_RNA.318-201ENST00000365131 97 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RNU1-73P-201ENST00000383971 164 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RPS3AP36-201ENST00000398190 775 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 DEFB108C-201ENST00000400154 252 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RNU2-52P-201ENST00000410680 190 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RPL19P1-201ENST00000411635 428 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 BPY2DP-201ENST00000422208 265 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 SKA2P1-201ENST00000425592 390 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC098614.2-201ENST00000426040 255 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 GTF2IP20-201ENST00000431663 360 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RPL36AP53-201ENST00000432891 316 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC009961.2-201ENST00000435771 251 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC098831.1-201ENST00000440661 216 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AL136380.1-201ENST00000447970 162 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 GSTA11P-201ENST00000452866 669 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RPS27AP10-201ENST00000496103 208 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC079140.3-201ENST00000511111 550 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 MTCO3P28-201ENST00000513351 515 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 NBR2-204ENST00000587322 63 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC005498.1-201ENST00000592125 465 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC008739.2-201ENST00000597006 317 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 BNIP3P9-201ENST00000603714 553 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RPL23AP88-201ENST00000605759 454 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 AC002064.3-201ENST00000623448 346 ntBASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
SMC4Q9NTJ3 RNU6-946P-201ENST00000383878 107 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms