Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AC078814.3-201ENST00000553036 491 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AL163153.1-201ENST00000554223 283 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 MIR4782-201ENST00000577987 79 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AC060780.3-201ENST00000589464 80 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AC073539.2-201ENST00000597113 165 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AC092747.3-201ENST00000603769 301 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AC092807.2-201ENST00000609367 243 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NECTIN3Q9NQS3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 MTND5P7-201ENST00000413558 1798 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 MIR412-201ENST00000362142 91 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AL359837.1-201ENST00000381357 287 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 SNORA48.7-201ENST00000391302 135 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 EI24P2-201ENST00000397776 1076 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 BX682237.1-201ENST00000415016 335 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC009161.1-201ENST00000417306 376 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 TOMM20P4-201ENST00000427861 435 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AL078601.1-201ENST00000444542 271 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 RPS3AP46-201ENST00000448352 682 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 RPS29P20-201ENST00000489592 171 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC116353.2-201ENST00000505332 712 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC018710.1-201ENST00000506509 158 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC104619.4-201ENST00000510773 249 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 TBCAP3-201ENST00000512475 312 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC074344.1-201ENST00000512823 224 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 TRAV37-201ENST00000553906 342 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AL118558.2-201ENST00000556294 238 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC007938.3-201ENST00000604965 623 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 BNIP3P10-201ENST00000605360 577 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AL161629.2-201ENST00000615347 275 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 MIR8058-201ENST00000615737 89 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AC022418.1-201ENST00000624118 445 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AL034408.1-202ENST00000636088 415 ntBASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
NECTIN3Q9NQS3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC233263.6-201ENST00000631132 1963 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 SNORD3E-201ENST00000362899 217 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 PTMAP5-201ENST00000393073 333 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 POLHP1-201ENST00000411806 470 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 RPL26P27-201ENST00000414397 437 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 RPL30P16-201ENST00000419341 429 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 MTND4LP11-201ENST00000422184 280 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC073063.1-201ENST00000434352 607 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 BRK1P2-201ENST00000442875 223 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AL590639.1-201ENST00000456484 337 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC092798.1-201ENST00000458542 409 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 RNU7-167P-201ENST00000459160 62 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC128713.1-201ENST00000471495 306 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 FCF1P3-201ENST00000496394 590 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC110768.1-201ENST00000509222 400 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC098799.2-201ENST00000509466 868 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 RNU6-189P-201ENST00000516120 101 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AP000763.2-201ENST00000540641 163 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AL391261.3-201ENST00000557194 520 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AL035413.2-201ENST00000604801 525 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 AL161912.2-201ENST00000565707 3007 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms