Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 HMGB1P33-201ENST00000563485 527 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC005951.2-201ENST00000576282 495 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC106900.2-201ENST00000604994 317 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AP001330.5-201ENST00000607176 411 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 MIR6076-201ENST00000617521 113 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC139792.3-201ENST00000623525 224 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 MTND5P17-201ENST00000418405 1603 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC092593.1-201ENST00000515413 1815 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC008568.2-201ENST00000623862 2313 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AL079305.1-201ENST00000623159 3008 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 RNU1-35P-201ENST00000362782 153 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 RNU6-1322P-201ENST00000364309 107 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 U3.12-201ENST00000364498 214 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 Y_RNA.367-201ENST00000365544 101 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 CD24P4-201ENST00000382840 243 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 RN7SKP140-201ENST00000411196 284 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 UBE2V1P8-201ENST00000437166 265 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AL049874.1-201ENST00000489560 388 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 ARL4AP2-201ENST00000507378 601 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC009646.1-201ENST00000510455 318 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 NRON-201ENST00000517270 370 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 MTND4LP26-201ENST00000518144 282 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 OR5BN1P-201ENST00000532955 829 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AC174048.1-201ENST00000603389 144 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 Z84480.1-201ENST00000605131 311 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AF250324.2-201ENST00000608299 610 ntBASIC3.31□□□□□ -1.88
DDX4Q9NQI0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX4Q9NQI0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 OR4G2P-202ENST00000641004 1759 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 Y_RNA.372-201ENST00000365599 102 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 XGY1-201ENST00000381172 446 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 RNU6-817P-201ENST00000391083 104 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 CALM2P3-201ENST00000400429 449 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL356057.3-201ENST00000402607 340 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL590002.1-201ENST00000406554 418 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 RNU6-387P-201ENST00000411331 105 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 RPS15AP6-201ENST00000420703 385 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 ARL5AP4-201ENST00000430731 512 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC027673.1-201ENST00000456245 405 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL356010.1-201ENST00000456364 102 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC013267.1-201ENST00000458227 267 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC116562.3-201ENST00000506136 177 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 RNU6-927P-201ENST00000516199 100 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AP001646.1-201ENST00000527936 915 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC068587.5-201ENST00000528506 175 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL157687.1-201ENST00000554853 619 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC092954.2-201ENST00000609103 430 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC090517.2-201ENST00000614966 680 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL160394.1-201ENST00000624765 724 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AL359693.1-201ENST00000614959 2407 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX4Q9NQI0 AC090740.1-201ENST00000623193 2262 ntBASIC3.3□□□□□ -1.88
DDX4Q9NQI0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX4Q9NQI0 ELF2P3-201ENST00000445099 1506 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms