Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL591416.1-201ENST00000404015 867 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AL359634.1-202ENST00000404721 284 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 RN7SKP32-201ENST00000410167 303 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC003685.2-201ENST00000422795 395 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC010099.3-201ENST00000423896 409 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AL593851.1-201ENST00000426171 157 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 MRPS17P3-201ENST00000465453 385 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 OR5BN1P-201ENST00000532955 829 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC123904.2-201ENST00000548059 300 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 MIR4769-201ENST00000584126 77 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AP001981.2-201ENST00000603241 418 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC239868.4-201ENST00000608318 671 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC108747.1-201ENST00000609508 535 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC103710.1-201ENST00000610003 901 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC005332.10-201ENST00000612725 619 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 MIR7515-201ENST00000637837 67 ntBASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RPAP3Q9H6T3 RNU5A-8P-201ENST00000364102 114 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 RNU6-809P-201ENST00000384461 107 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 MIR764-201ENST00000390811 85 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 RNU6-278P-201ENST00000390945 109 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 RPS20P2-201ENST00000402520 389 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AC007560.1-201ENST00000426912 237 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 IPO7P1-201ENST00000442031 636 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 IFNA11P-201ENST00000446352 526 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AC013267.1-201ENST00000458227 267 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 RPL23AP41-201ENST00000484754 458 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AF131216.2-201ENST00000512316 564 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 RN7SKP258-201ENST00000517151 304 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AC004805.2-201ENST00000605382 482 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AC025594.3-201ENST00000613068 790 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 AC023510.2-201ENST00000622162 746 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 MIR6766-201ENST00000622641 72 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
RPAP3Q9H6T3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 RNY4P24-201ENST00000362735 96 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 RNU6-512P-201ENST00000364438 103 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 RNU2-49P-201ENST00000410666 184 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 RPL23AP39-201ENST00000415533 405 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 USP9YP13-201ENST00000417797 480 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 Z98742.2-201ENST00000431564 187 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 TIMM9P1-201ENST00000436122 256 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AL008629.1-201ENST00000438615 184 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 PGBD4P3-201ENST00000440731 581 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC108059.3-201ENST00000456388 214 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC068587.2-201ENST00000478386 781 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 SNORA3.4-201ENST00000515969 96 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 RNU6-678P-201ENST00000516832 109 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AL356432.3-201ENST00000568952 465 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 RPS3AP23-202ENST00000574601 686 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC008751.2-201ENST00000597885 980 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AP000403.1-201ENST00000603349 851 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC110994.2-201ENST00000635481 492 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 AC241585.2-209ENST00000638217 143 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 MTND4P35-201ENST00000604257 1375 ntBASIC2.6□□□□□ -1.99
RPAP3Q9H6T3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 RNU6-701P-201ENST00000384059 107 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 MIR888-201ENST00000401186 77 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 MTCYBP36-201ENST00000404146 440 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 RNU6-920P-201ENST00000410926 92 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms