Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC105224.1-201ENST00000587055 421 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 DPPA3P3-201ENST00000603842 430 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC016925.2-201ENST00000605108 242 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 CTHRC1P1-201ENST00000605383 469 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC103710.2-201ENST00000609912 942 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC138305.3-201ENST00000624988 240 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 MTND5P16-201ENST00000460269 1703 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC073343.1-201ENST00000328239 651 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.202-201ENST00000364083 110 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 SNORA22B-201ENST00000383876 138 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 RNU6-308P-201ENST00000390957 107 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL357075.1-201ENST00000404107 726 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 RNA5SP31-201ENST00000411144 127 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC063979.1-201ENST00000415539 377 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 MTATP6P16-201ENST00000434543 526 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 HMGB3P30-201ENST00000457863 606 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 SNORA59A-201ENST00000459326 152 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL049714.1-201ENST00000466686 347 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC012181.1-201ENST00000479895 423 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC092436.1-201ENST00000506450 503 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 HMGB3P15-201ENST00000507326 574 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC080078.3-201ENST00000605407 463 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AC004908.2-201ENST00000609090 574 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.48□□□□□ -1.85
EBF3Q9H4W6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL356274.2-201ENST00000624379 3752 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 AL353743.1-202ENST00000431724 1695 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 MFSD8-233ENST00000641482 4860 ntBASIC3.48□□□□□ -1.85
EBF3Q9H4W6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 OR1S2-201ENST00000302592 978 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.167-201ENST00000363735 109 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 U3.12-201ENST00000364498 214 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RNY3P13-201ENST00000365542 102 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.395-201ENST00000383945 109 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.422-201ENST00000384054 114 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RNU6-463P-201ENST00000384340 107 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RNU6-1105P-201ENST00000384774 107 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 PMCHL1-202ENST00000423102 261 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 ARF4P2-201ENST00000430209 526 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 CKS1BP5-201ENST00000434172 273 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RPS29P15-201ENST00000458329 171 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RNU7-152P-201ENST00000458982 64 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RNU7-59P-201ENST00000459101 61 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 snoU13.3-201ENST00000459441 104 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RPL21P99-201ENST00000480369 423 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 APOOP4-201ENST00000513530 597 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 RNU6-1137P-201ENST00000517073 99 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AP006245.1-201ENST00000522549 120 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AC026333.2-201ENST00000542164 106 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AC128657.1-201ENST00000549459 145 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 MIR4424-201ENST00000585257 86 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 MIR3942-201ENST00000585264 109 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AL670379.11-201ENST00000604059 253 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AL670379.10-201ENST00000604330 253 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 APOOP1-201ENST00000604695 592 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AL670379.12-201ENST00000605291 253 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 AL670379.9-201ENST00000605428 253 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 uc_338.15-201ENST00000615470 191 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 MTND4P14-201ENST00000435799 1354 ntBASIC3.47□□□□□ -1.85
EBF3Q9H4W6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.47□□□□□ -1.85
EBF3Q9H4W6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
EBF3Q9H4W6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.46□□□□□ -1.85
EBF3Q9H4W6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.85
EBF3Q9H4W6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms