Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 TRAV28-201ENST00000557548 323 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AL355472.4-201ENST00000610233 626 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AC091931.1-201ENST00000623488 728 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AC093591.3-201ENST00000634516 308 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 MIR3974-201ENST00000637126 96 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.35□□□□□ -2.03
NXF3Q9H4D5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NXF3Q9H4D5 CR848007.1-201ENST00000442354 1699 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 OR4G2P-202ENST00000641004 1759 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 Y_RNA.46-201ENST00000362695 102 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RNU6-270P-201ENST00000364131 105 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RNU6-432P-201ENST00000384196 109 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 SNORD115.1-201ENST00000391109 76 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RPS20P2-201ENST00000402520 389 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 MTCYBP36-201ENST00000404146 440 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC009518.2-201ENST00000418056 731 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC090960.1-201ENST00000421072 306 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC098614.2-201ENST00000426040 255 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AL358075.3-201ENST00000426289 226 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC009414.1-201ENST00000427200 443 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AL049734.2-201ENST00000441066 616 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 UBE2D3P4-201ENST00000441973 436 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC118469.1-201ENST00000442943 488 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 CBWD4P-201ENST00000445695 655 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RPS20P20-201ENST00000460498 340 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RPS20P22-201ENST00000473700 357 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RPL23AP41-201ENST00000484754 458 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 Y_RNA.688-201ENST00000516565 95 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RNU6-928P-201ENST00000516876 104 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RNU6-201P-201ENST00000517100 61 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC005498.1-201ENST00000592125 465 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC068790.3-201ENST00000602988 553 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC004908.2-201ENST00000609090 574 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC012360.2-201ENST00000609349 391 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AL603758.1-201ENST00000618654 241 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 AC068057.2-201ENST00000624047 895 ntBASIC2.34□□□□□ -2.03
NXF3Q9H4D5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
NXF3Q9H4D5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.04
NXF3Q9H4D5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NXF3Q9H4D5 AC080100.1-201ENST00000624239 5356 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MT-TH-201ENST00000387441 69 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 CCNG1P1-201ENST00000406783 885 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 RPL17P12-201ENST00000413391 526 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC092047.1-201ENST00000424997 240 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AL445687.1-201ENST00000439946 251 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 BNIP3P2-201ENST00000441221 577 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 RPS27AP8-201ENST00000452665 445 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AP000797.1-201ENST00000478870 387 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 TTC39CP1-201ENST00000512513 755 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 RNU6-840P-201ENST00000517275 65 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MTND4LP18-201ENST00000526864 291 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AP000907.2-201ENST00000530827 353 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 RANP3-201ENST00000530970 276 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AL133153.1-201ENST00000557756 303 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 MIR5697-201ENST00000578045 78 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC098826.3-201ENST00000603823 466 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AL031775.1-201ENST00000607014 887 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC007038.2-201ENST00000608095 740 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 OR10AB1P-201ENST00000609613 938 ntBASIC2.33□□□□□ -2.04
NXF3Q9H4D5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms