Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SNRPEP10-201ENST00000420249 274 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.38□□□□□ -1.87
CDT1Q9H211 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDT1Q9H211 AC012498.1-201ENST00000424037 437 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.38□□□□□ -1.87
CDT1Q9H211 RPL36AP53-201ENST00000432891 316 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 HMGN2P20-201ENST00000437531 273 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.38□□□□□ -1.87
CDT1Q9H211 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDT1Q9H211 AC006512.1-201ENST00000468816 291 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 RPS29P2-201ENST00000479278 136 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 RN7SL432P-201ENST00000484057 298 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.38□□□□□ -1.87
CDT1Q9H211 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.38□□□□□ -1.87
CDT1Q9H211 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
CDT1Q9H211 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.38□□□□□ -1.87
CDT1Q9H211 SUB1P1-201ENST00000524415 382 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.38□□□□□ -1.87
CDT1Q9H211 AL355836.1-201ENST00000555951 870 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 HMGB1P6-201ENST00000569046 646 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.38□□□□□ -1.87
CDT1Q9H211 BDH2P1-201ENST00000602288 736 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC093648.1-201ENST00000623546 606 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDT1Q9H211 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDT1Q9H211 OR4G2P-202ENST00000641004 1759 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.37□□□□□ -1.87
CDT1Q9H211 AC006020.1-201ENST00000420179 1854 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL136164.4-201ENST00000625013 2135 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 RNU4-73P-201ENST00000363164 141 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 Y_RNA.356-201ENST00000365475 113 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 SMIM11P1-201ENST00000369586 178 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 RNU6-332P-201ENST00000391193 108 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC016831.2-201ENST00000417179 352 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 MTCYBP8-201ENST00000422855 651 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 RPL7L1P10-201ENST00000427790 463 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.37□□□□□ -1.87
CDT1Q9H211 TXNP1-201ENST00000441872 371 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.37□□□□□ -1.87
CDT1Q9H211 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.37□□□□□ -1.87
CDT1Q9H211 AC020550.1-201ENST00000447385 163 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC012181.1-201ENST00000479895 423 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC116562.3-201ENST00000506136 177 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.37□□□□□ -1.87
CDT1Q9H211 SNORD27.1-201ENST00000516319 72 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AP006587.4-201ENST00000526053 529 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC068587.5-201ENST00000528506 175 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 HPRT1P3-201ENST00000539521 576 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.37□□□□□ -1.87
CDT1Q9H211 AC010525.2-201ENST00000590920 195 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC005261.5-201ENST00000596280 355 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.6-201ENST00000603753 252 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.11-201ENST00000604059 253 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC008162.1-201ENST00000604718 254 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.1-201ENST00000604752 252 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC106900.2-201ENST00000604994 317 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.5-201ENST00000605253 252 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.12-201ENST00000605291 253 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.8-201ENST00000605353 252 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AL670379.7-201ENST00000605823 252 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.37□□□□□ -1.87
CDT1Q9H211 AL162274.2-201ENST00000614406 332 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 ATP5A1P2-202ENST00000616464 443 ntBASIC3.37□□□□□ -1.87
CDT1Q9H211 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.37□□□□□ -1.87
CDT1Q9H211 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.37□□□□□ -1.87
CDT1Q9H211 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDT1Q9H211 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDT1Q9H211 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDT1Q9H211 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDT1Q9H211 Y_RNA.142-201ENST00000363491 102 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 SNORD81.2-201ENST00000365153 76 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CDT1Q9H211 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDT1Q9H211 MIR514A1-201ENST00000385133 98 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
CDT1Q9H211 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.36□□□□□ -1.87
CDT1Q9H211 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.36□□□□□ -1.87
CDT1Q9H211 SEPT14P3-201ENST00000439401 183 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AL732372.2-207ENST00000445840 183 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.36□□□□□ -1.87
CDT1Q9H211 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 SEPT14P2-201ENST00000453405 183 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 MTND3P22-201ENST00000510932 243 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AC010486.1-201ENST00000511793 424 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 SEPT14P4-201ENST00000513445 186 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 SNORA70.16-201ENST00000516390 95 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 FO082796.1-201ENST00000523795 183 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.36□□□□□ -1.87
CDT1Q9H211 AC023050.3-201ENST00000541142 333 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AL163153.1-201ENST00000554223 283 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.36□□□□□ -1.87
CDT1Q9H211 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.36□□□□□ -1.87
CDT1Q9H211 MIR4474-201ENST00000579189 78 ntBASIC3.36□□□□□ -1.87
CDT1Q9H211 AC024619.4-201ENST00000580924 316 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms