Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AL121821.2-201ENST00000556081 394 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AC100830.2-201ENST00000581636 240 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 MIR5690-201ENST00000583739 73 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AL020997.2-201ENST00000602607 184 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AL133255.1-201ENST00000606374 441 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 FTX_3.1-201ENST00000610451 147 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 MTND4LP32-201ENST00000636111 270 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AL133383.2-201ENST00000622958 2336 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 Y_RNA.315-201ENST00000365117 102 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 XGY1-201ENST00000381172 446 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RNU6-217P-201ENST00000384164 104 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 Y_RNA.482-201ENST00000384377 111 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RNU6-601P-201ENST00000384540 107 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 MIR10A-201ENST00000385043 110 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 MIR134-201ENST00000385258 73 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RNU6-1106P-201ENST00000390845 107 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 MIR1183-201ENST00000408856 89 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RNU6-370P-201ENST00000411008 104 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RNU6-293P-201ENST00000411259 106 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 UBE2V1P4-201ENST00000425374 344 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 MYL8P-204ENST00000431574 518 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 BRK1P2-201ENST00000442875 223 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AL078601.1-201ENST00000444542 271 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 HMGB3P22-202ENST00000451823 572 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RPL31P61-201ENST00000496160 376 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 HMGB3P15-201ENST00000507326 574 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 RNU6-1153P-201ENST00000516760 105 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AC110741.2-201ENST00000605278 268 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AL354798.1-201ENST00000622505 329 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 FP236240.3-201ENST00000623061 327 ntBASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CCDC113Q9H0I3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 SNORA40C-201ENST00000391285 128 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 RNU4-14P-201ENST00000410858 122 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AL592148.1-201ENST00000413568 445 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 HMGB1P37-201ENST00000439613 609 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC007677.1-201ENST00000445757 515 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC092798.1-201ENST00000458542 409 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 IMMP1LP2-201ENST00000552954 492 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 MIR4782-201ENST00000577987 79 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AC006130.2-201ENST00000586202 326 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 AL355598.1-201ENST00000604169 202 ntBASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC113Q9H0I3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC022336.2-201ENST00000568966 2538 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 U1.1-201ENST00000384101 164 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 MTCYBP4-201ENST00000401524 249 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 SNORA11-201ENST00000408789 128 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 RNU6-1304P-201ENST00000411374 106 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AL590632.1-201ENST00000424289 371 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC098614.2-201ENST00000426040 255 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 HMGN2P7-201ENST00000456186 273 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 PPIAP15-201ENST00000479662 484 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC069499.1-201ENST00000489433 509 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC092436.3-201ENST00000511788 257 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 RNU6-1170P-201ENST00000515974 106 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms