Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC087241.2-201ENST00000535801 324 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 AP002770.2-201ENST00000543613 532 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 AC098826.3-201ENST00000603823 466 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 AL161798.1-201ENST00000604630 131 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 BCRP9-201ENST00000605312 388 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 AC107214.2-201ENST00000608204 634 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 AL603755.1-201ENST00000619504 163 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 AC012150.2-201ENST00000621300 544 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 MIR6766-201ENST00000622641 72 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 U2.21-201ENST00000637295 81 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 MTND4P16-201ENST00000466108 1367 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
CCSER1Q9C0I3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 RNU6-778P-201ENST00000363269 103 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 RPS4XP7-201ENST00000406274 780 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 MTATP6P7-201ENST00000453315 681 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC107626.1-201ENST00000471084 183 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC005178.1-201ENST00000508392 440 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC098591.2-201ENST00000510152 315 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 MIR4435-1-201ENST00000582552 80 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 OR10AB1P-201ENST00000609613 938 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC122133.1-201ENST00000613964 233 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AL590808.1-201ENST00000618696 141 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 FRG1KP-201ENST00000623592 341 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 AC006927.3-201ENST00000638789 384 ntBASIC2.59□□□□□ -1.99
CCSER1Q9C0I3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCSER1Q9C0I3 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -2
CCSER1Q9C0I3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 Y_RNA.169-201ENST00000363745 96 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 RNU6-553P-201ENST00000364047 96 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 U3.37-201ENST00000408528 213 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 RNU2-62P-201ENST00000410868 191 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 ISCA1P1-201ENST00000426679 387 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC010153.1-201ENST00000432862 727 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 RPL36AP53-201ENST00000432891 316 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 LARP1BP3-201ENST00000437229 869 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC073901.1-201ENST00000462471 408 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC135628.1-201ENST00000568867 534 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC024619.4-201ENST00000580924 316 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 AP000403.1-201ENST00000603349 851 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 MTCYBP22-201ENST00000603788 447 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC011939.3-201ENST00000613686 466 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC068057.2-201ENST00000624047 895 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 AC092192.1-201ENST00000633154 1018 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 MIR7157-201ENST00000635801 60 ntBASIC2.58□□□□□ -2
CCSER1Q9C0I3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.58□□□□□ -2
CCSER1Q9C0I3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCSER1Q9C0I3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 MTND5P30-201ENST00000452896 1731 ntBASIC2.57□□□□□ -2
CCSER1Q9C0I3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 RNA5SP289-201ENST00000362332 137 ntBASIC2.57□□□□□ -2
CCSER1Q9C0I3 OR5H15-201ENST00000383696 930 ntBASIC2.57□□□□□ -2
CCSER1Q9C0I3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 MTND2P18-201ENST00000419962 1030 ntBASIC2.57□□□□□ -2
CCSER1Q9C0I3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.57□□□□□ -2
CCSER1Q9C0I3 MYL8P-204ENST00000431574 518 ntBASIC2.57□□□□□ -2
CCSER1Q9C0I3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms