Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 MAPK10-372ENST00000641954 3413 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 Y_RNA.187-201ENST00000363918 113 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 MIR559-201ENST00000385188 96 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 RPL21P65-201ENST00000406094 466 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-370P-201ENST00000411008 104 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL592045.1-201ENST00000429867 352 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC073063.1-201ENST00000434352 607 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 HSPD1P21-201ENST00000436541 245 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 PRSS3P4-201ENST00000453323 162 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC104472.2-201ENST00000469035 601 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 RNA5SP471-201ENST00000516971 106 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC087854.1-201ENST00000519706 414 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL163153.1-201ENST00000554223 283 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 MIR1273C-201ENST00000578669 77 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 MIR4738-201ENST00000579134 87 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL355365.1-201ENST00000616480 294 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL713922.2-201ENST00000619384 716 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 Z99571.1-201ENST00000636677 394 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 AL079305.1-201ENST00000623159 3008 ntBASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.57□□□□□ -1.84
AMBRA1Q9C0C7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RLIMP1-201ENST00000339626 1680 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MIR369-201ENST00000362155 70 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 Y_RNA.146-201ENST00000363549 102 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 SNORA7.2-201ENST00000364446 145 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-283P-201ENST00000364788 107 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-474P-201ENST00000384243 107 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MIR578-201ENST00000384828 96 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MIR301A-201ENST00000385261 86 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MIR1290-201ENST00000408735 78 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AL360271.2-201ENST00000447710 161 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 Y_RNA.639-201ENST00000458981 102 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RNU7-152P-201ENST00000458982 64 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AP000873.1-201ENST00000463987 400 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RPL7P5-201ENST00000471472 736 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RN7SKP209-201ENST00000516888 304 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MTCO3P13-201ENST00000577757 781 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MIR548AC-201ENST00000585049 88 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC073539.2-201ENST00000597113 165 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AL080274.1-201ENST00000605565 220 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC124303.1-201ENST00000605703 360 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC002044.1-201ENST00000606707 158 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 uc_338.32-201ENST00000615087 172 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 CR392039.5-201ENST00000623201 510 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AL512643.1-201ENST00000635735 524 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC008725.1-201ENST00000605123 2263 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 AC073073.2-201ENST00000609827 2578 ntBASIC3.56□□□□□ -1.84
AMBRA1Q9C0C7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms