Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 RN7SKP27-201ENST00000410684 333 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 RAC1P3-201ENST00000416129 580 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 CYP4F29P-201ENST00000420685 446 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 PGBD4P6-201ENST00000421501 610 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 ARL5AP4-201ENST00000430731 512 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC108860.1-201ENST00000484521 383 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC008716.1-201ENST00000511084 513 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC040926.1-201ENST00000530195 238 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 CYCSP29-201ENST00000533731 318 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC125232.2-201ENST00000592457 143 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 IPO5P1-202ENST00000600039 287 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC025946.2-201ENST00000603398 234 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 AC078938.1-201ENST00000620993 318 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 MTND5P27-201ENST00000428871 1720 ntBASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
FOXP3Q9BZS1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC009812.4-201ENST00000569134 1805 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC018555.1-201ENST00000567548 1980 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC233263.6-201ENST00000631132 1963 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 RNA5SP513-201ENST00000364648 118 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 RNU6-356P-201ENST00000384140 107 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 RNU6-790P-201ENST00000384479 105 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 RNU4-70P-201ENST00000384579 139 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 Y_RNA.552-201ENST00000384665 112 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 SNORA3C-201ENST00000408792 125 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AL353997.1-201ENST00000432936 108 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 PHBP16-201ENST00000446318 950 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 SUMO2P6-201ENST00000505273 288 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC113155.1-201ENST00000511141 769 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 APOOP4-201ENST00000513530 597 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AP000889.1-201ENST00000530968 660 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 CBX3P8-201ENST00000532412 525 ntBASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXP3Q9BZS1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 Y_RNA.324-201ENST00000365165 102 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 Y_RNA.461-201ENST00000384263 103 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 SNORA70C-201ENST00000384538 135 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 SNORA57.1-201ENST00000391227 145 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 RN7SKP177-201ENST00000410567 355 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 RNU6-325P-201ENST00000411132 105 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AL451062.2-201ENST00000427515 271 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 RPL23AP81-201ENST00000455252 467 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 RPS15AP34-201ENST00000487776 387 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AC020593.1-201ENST00000507399 299 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 ACA59.1-201ENST00000515966 143 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 MRPL49P2-201ENST00000521066 465 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 IGHV3-76-201ENST00000522465 295 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AL121603.1-201ENST00000553815 142 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 uc_338.32-201ENST00000615087 172 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 RMST_4.1-201ENST00000616886 107 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 ZYXP1-201ENST00000617638 118 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AL445567.2-201ENST00000618935 498 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AC015967.1-201ENST00000619893 476 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 SNORD39.4-201ENST00000620099 78 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AC106871.1-201ENST00000568324 3102 ntBASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXP3Q9BZS1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXP3Q9BZS1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms