Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DEFB130D-201ENST00000426866 237 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 RPL30P4-201ENST00000429309 333 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 MTCYBP15-201ENST00000433123 1127 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AC092427.1-201ENST00000439177 601 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 MRPL42P4-201ENST00000453267 443 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AL160314.1-201ENST00000490836 438 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AC114981.1-201ENST00000503897 678 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AC020699.1-201ENST00000505161 445 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 AL589994.2-201ENST00000621124 579 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 MIR6734-201ENST00000621166 68 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 MIR1322-201ENST00000638013 71 ntBASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
UPF3BQ9BZI7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
UPF3BQ9BZI7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 U6.112-201ENST00000384129 70 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 MIR218-1-201ENST00000384999 110 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AL451054.2-201ENST00000420896 202 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC117503.1-201ENST00000472241 394 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 BZW1P2-201ENST00000473537 826 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC121161.1-201ENST00000510606 652 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC091965.2-201ENST00000512324 613 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 MRPS33P3-201ENST00000513456 322 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC012435.1-202ENST00000568772 240 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AP005136.1-201ENST00000579765 429 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 MIR4452-201ENST00000583004 71 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC010928.2-201ENST00000588017 287 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AL357094.1-201ENST00000603845 844 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AL121652.1-201ENST00000608851 448 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AL359740.1-201ENST00000624340 592 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 AC011477.1-204ENST00000623416 1325 ntBASIC1.9□□□□□ -2.11
UPF3BQ9BZI7 ZNF876P-202ENST00000398732 1485 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AC233981.2-201ENST00000611524 1614 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 POLHP1-201ENST00000411806 470 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 XKRYP1-201ENST00000423438 492 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 XKRYP2-201ENST00000432915 492 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 MTND2P3-201ENST00000452458 470 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 HMGB1P36-201ENST00000487709 576 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 Y_RNA.670-201ENST00000516255 105 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 SNORA48.9-201ENST00000516419 162 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 RNA5SP137-201ENST00000516833 135 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AL355297.2-201ENST00000604792 129 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 MIR3199-2-201ENST00000636243 86 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 MTCO1P4-201ENST00000520516 1409 ntBASIC1.89□□□□□ -2.11
UPF3BQ9BZI7 AL138713.1-201ENST00000624026 2130 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RNU6-28P-201ENST00000362378 107 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RNU6-778P-201ENST00000363269 103 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RNU4-51P-201ENST00000364206 140 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RNU6-637P-201ENST00000384050 107 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 MIR147B-201ENST00000390185 80 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RPL26P27-201ENST00000414397 437 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 BX664727.1-201ENST00000416024 466 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 SNRPEP9-201ENST00000436794 238 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RPL21P134-201ENST00000453468 483 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC013267.1-201ENST00000458227 267 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC107032.1-201ENST00000485945 480 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 TMEM251P1-201ENST00000503717 318 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC093677.1-201ENST00000514414 678 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RNA5SP112-201ENST00000515937 99 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 RNU6-840P-201ENST00000517275 65 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 MIR4765-201ENST00000585007 77 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AL390208.1-201ENST00000605885 644 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 MIR8084-201ENST00000614105 89 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AL357080.1-201ENST00000617394 239 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC084824.4-201ENST00000620106 731 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AC097460.3-201ENST00000623099 442 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 HPVC1-201ENST00000629899 1198 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms