Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 TMSB10P2-201ENST00000416049 131 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 SNRPEP4-201ENST00000435815 279 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AL031274.1-201ENST00000450334 232 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.653-201ENST00000459091 95 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 PPIAP15-201ENST00000479662 484 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RPL30P14-201ENST00000482744 348 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RN7SL812P-201ENST00000493791 279 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC020593.1-201ENST00000507399 299 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RNU6-1170P-201ENST00000515974 106 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 SNORA31.9-201ENST00000516429 84 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RNU6-1213P-201ENST00000517075 94 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC020914.4-201ENST00000597690 277 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AL161729.3-201ENST00000603533 673 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC018462.2-201ENST00000605375 395 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC080078.3-201ENST00000605407 463 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AL161629.2-201ENST00000615347 275 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AC090971.5-201ENST00000621102 293 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 LINC02471-203ENST00000641941 4752 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.151-201ENST00000363566 112 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 RNA5SP31-201ENST00000411144 127 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 snoU109.2-201ENST00000459316 135 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AC091153.1-201ENST00000466297 402 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 RPL32P34-201ENST00000486380 400 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AC113155.1-201ENST00000511141 769 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 VN1R85P-201ENST00000601587 426 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AP000654.2-201ENST00000605633 586 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 HMGB1P50-201ENST00000605814 607 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 ZYXP1-201ENST00000617638 118 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 MIR6891-201ENST00000618788 93 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AL445567.2-201ENST00000618935 498 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 AC138627.2-201ENST00000624202 601 ntBASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM55Q9BYV6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 MFSD8-242ENST00000641690 4199 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 RNU6-72P-201ENST00000384285 79 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.473-201ENST00000384333 102 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 SNORA70C-201ENST00000384538 135 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 RNU6-310P-201ENST00000384655 107 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 MIR517A-201ENST00000385001 87 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AL030996.1-201ENST00000411430 235 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC011933.1-201ENST00000413334 321 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC005534.2-201ENST00000431047 433 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC007389.2-201ENST00000434630 306 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 NOTCH2P1-201ENST00000443481 624 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 MTCO3P10-201ENST00000455912 772 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 HMGN2P7-201ENST00000456186 273 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 ELOCP24-201ENST00000456370 334 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 RPL30P15-201ENST00000457129 321 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC027575.1-201ENST00000481064 460 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC018437.1-201ENST00000492214 406 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 RPS27AP10-201ENST00000496103 208 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.708-201ENST00000516950 96 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 MRPL49P2-201ENST00000521066 465 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 TRAV32-201ENST00000553993 340 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 AC064801.1-201ENST00000612025 407 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 MTND4P23-201ENST00000447723 1363 ntBASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM55Q9BYV6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RNU6-827P-201ENST00000365553 106 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 SNORD42.2-201ENST00000365570 69 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RNU6-328P-201ENST00000390887 106 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 SNORA75.4-201ENST00000391278 119 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.594-201ENST00000410373 140 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RNU6-1050P-201ENST00000410388 107 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 NDUFS5P4-201ENST00000412983 318 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 Z99755.1-201ENST00000414048 380 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 AL117339.3-201ENST00000418733 162 ntBASIC4.23□□□□□ -1.73
TRIM55Q9BYV6 RPL23AP82-202ENST00000427528 469 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms