Protein–RNA interactions for Protein: Q9BTM1

H2AFJ, Histone H2A.J, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFJQ9BTM1 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 AC010338.1-201ENST00000621823 717 ntBASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2AFJQ9BTM1 AC005183.1-201ENST00000603687 1979 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AL354685.2-201ENST00000448218 1447 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 Y_RNA.450-201ENST00000384198 113 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 GTF2IP20-201ENST00000431663 360 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 RPL23AP22-201ENST00000437556 453 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC092989.1-201ENST00000481235 277 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 RPL21P129-201ENST00000491732 478 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 RNU1-103P-201ENST00000516502 125 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC009902.1-201ENST00000519351 183 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC025755.1-201ENST00000521306 278 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AL157687.1-201ENST00000554853 619 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AL162413.1-201ENST00000603198 110 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 MIR7975-201ENST00000619350 68 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 MIR1321-201ENST00000637766 79 ntBASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H2AFJQ9BTM1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 Y_RNA.38-201ENST00000362617 102 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 RNY4P14-201ENST00000363656 96 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 MIR578-201ENST00000384828 96 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 MIR670-201ENST00000390142 98 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 SNORA48.7-201ENST00000391302 135 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 MIR888-201ENST00000401186 77 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 BTF3P7-201ENST00000407097 488 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 RNU4-46P-201ENST00000410818 138 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 HMGN2P30-201ENST00000423237 256 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 SNRPFP3-201ENST00000457792 225 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 RPL21P41-201ENST00000459863 264 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 MTCO3P9-201ENST00000506989 781 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 MTND1P35-201ENST00000526739 508 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AL391261.3-201ENST00000557194 520 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 U6atac.1-201ENST00000616025 117 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 MIR6075-201ENST00000620782 95 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 YWHAEP7-203ENST00000622054 312 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 AL160394.1-201ENST00000624765 724 ntBASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2AFJQ9BTM1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H2AFJQ9BTM1 AL139276.1-201ENST00000311910 1001 ntBASIC3.1□□□□□ -1.91
H2AFJQ9BTM1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H2AFJQ9BTM1 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
H2AFJQ9BTM1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms