Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-37P-201ENST00000362692 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-11P-201ENST00000364234 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-7-201ENST00000364784 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-8-201ENST00000365467 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-25P-201ENST00000383873 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-1-201ENST00000383898 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-48P-201ENST00000384161 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-36P-201ENST00000384172 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-4P-201ENST00000384205 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-5P-201ENST00000384238 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-3P-201ENST00000384314 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-16P-201ENST00000384385 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-15P-201ENST00000384534 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-2-201ENST00000384627 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-29P-201ENST00000384637 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-9-201ENST00000384776 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 MTCYBP2-201ENST00000407745 171 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNA5SP113-201ENST00000410486 84 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU2-25P-201ENST00000411041 191 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 C4BPAP2-201ENST00000428434 478 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RPL7P5-201ENST00000471472 736 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RN7SL41P-201ENST00000476144 297 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 OR7H2P-201ENST00000513483 306 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 Y_RNA.713-201ENST00000517013 96 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-789P-201ENST00000517105 102 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC109479.2-201ENST00000517842 174 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-6P-201ENST00000606623 107 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 MIR6780A-201ENST00000615089 68 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 AC090132.2-201ENST00000615881 347 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 Z75746.1-201ENST00000440243 2080 ntBASIC4.65□□□□□ -1.67
TRIM56Q9BRZ2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AL590240.1-201ENST00000334118 313 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 MIR335-201ENST00000362173 94 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 RNA5SP28-201ENST00000363841 119 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 SNORD27-201ENST00000363981 72 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 MIR921-201ENST00000401133 56 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 Y_RNA.623-201ENST00000411128 95 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 SNORD56-201ENST00000413522 71 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 TOMM22P1-201ENST00000418578 312 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AC140479.3-201ENST00000418944 1126 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AC005154.2-201ENST00000438110 379 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-406P-201ENST00000516470 107 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 AC009779.6-201ENST00000603972 165 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 RN7SL722P-201ENST00000617780 284 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 RN7SL565P-201ENST00000618246 284 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 MIR6853-201ENST00000619642 74 ntBASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM56Q9BRZ2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 ZFRP1-201ENST00000457579 2970 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC007685.1-201ENST00000329806 452 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 SNORD14B-201ENST00000364533 90 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 U3.13-201ENST00000364804 214 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-384P-201ENST00000364900 104 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-827P-201ENST00000365553 106 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 MIR659-201ENST00000384963 97 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-1203P-201ENST00000410703 110 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms