Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 Y_RNA.154-201ENST00000363624 102 ntBASIC2.57□□□□□ -2
VGLL1Q99990 RNY3P1-201ENST00000365085 102 ntBASIC2.57□□□□□ -2
VGLL1Q99990 RNY3-201ENST00000365484 102 ntBASIC2.57□□□□□ -2
VGLL1Q99990 Y_RNA.373-201ENST00000365600 103 ntBASIC2.57□□□□□ -2
VGLL1Q99990 Y_RNA.490-201ENST00000384413 102 ntBASIC2.57□□□□□ -2
VGLL1Q99990 RN7SKP140-201ENST00000411196 284 ntBASIC2.57□□□□□ -2
VGLL1Q99990 ATP5A1P2-201ENST00000412323 255 ntBASIC2.57□□□□□ -2
VGLL1Q99990 USP9YP20-201ENST00000419224 558 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.57□□□□□ -2
VGLL1Q99990 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.57□□□□□ -2
VGLL1Q99990 AL121871.1-201ENST00000443413 436 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC008264.1-201ENST00000447612 367 ntBASIC2.57□□□□□ -2
VGLL1Q99990 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.57□□□□□ -2
VGLL1Q99990 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.57□□□□□ -2
VGLL1Q99990 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.57□□□□□ -2
VGLL1Q99990 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.57□□□□□ -2
VGLL1Q99990 RPL23AP55-201ENST00000498163 452 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.57□□□□□ -2
VGLL1Q99990 RNU6-864P-201ENST00000516256 108 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.57□□□□□ -2
VGLL1Q99990 AC022690.1-201ENST00000526681 550 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.57□□□□□ -2
VGLL1Q99990 AL355375.2-201ENST00000574825 175 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC004832.5-201ENST00000608677 401 ntBASIC2.57□□□□□ -2
VGLL1Q99990 Z82243.1-201ENST00000609432 473 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC009570.1-201ENST00000609599 745 ntBASIC2.57□□□□□ -2
VGLL1Q99990 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.57□□□□□ -2
VGLL1Q99990 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 DUSP12P1-201ENST00000612874 516 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC103705.1-201ENST00000619013 241 ntBASIC2.57□□□□□ -2
VGLL1Q99990 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
VGLL1Q99990 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
VGLL1Q99990 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.57□□□□□ -2
VGLL1Q99990 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.57□□□□□ -2
VGLL1Q99990 FAM35CP-201ENST00000554755 2470 ntBASIC2.57□□□□□ -2
VGLL1Q99990 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.56□□□□□ -2
VGLL1Q99990 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
VGLL1Q99990 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VGLL1Q99990 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VGLL1Q99990 RN7SKP280-201ENST00000364196 304 ntBASIC2.56□□□□□ -2
VGLL1Q99990 SNORA7.2-201ENST00000364446 145 ntBASIC2.56□□□□□ -2
VGLL1Q99990 Y_RNA.339-201ENST00000365325 102 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RNU1-64P-201ENST00000365443 163 ntBASIC2.56□□□□□ -2
VGLL1Q99990 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.56□□□□□ -2
VGLL1Q99990 Y_RNA.394-201ENST00000383942 103 ntBASIC2.56□□□□□ -2
VGLL1Q99990 Y_RNA.414-201ENST00000384011 101 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RNU6-116P-201ENST00000384042 109 ntBASIC2.56□□□□□ -2
VGLL1Q99990 Y_RNA.530-201ENST00000384587 101 ntBASIC2.56□□□□□ -2
VGLL1Q99990 Y_RNA.534-201ENST00000384599 112 ntBASIC2.56□□□□□ -2
VGLL1Q99990 MIR607-201ENST00000385241 96 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RNU6-817P-201ENST00000391083 104 ntBASIC2.56□□□□□ -2
VGLL1Q99990 HSPE1P26-201ENST00000405341 275 ntBASIC2.56□□□□□ -2
VGLL1Q99990 MIR1193-201ENST00000408109 78 ntBASIC2.56□□□□□ -2
VGLL1Q99990 POLHP1-201ENST00000411806 470 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RPS20P15-201ENST00000412792 311 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.56□□□□□ -2
VGLL1Q99990 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.56□□□□□ -2
VGLL1Q99990 BX682237.1-201ENST00000415016 335 ntBASIC2.56□□□□□ -2
VGLL1Q99990 ARL5AP1-201ENST00000418991 388 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.56□□□□□ -2
VGLL1Q99990 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.56□□□□□ -2
VGLL1Q99990 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.56□□□□□ -2
VGLL1Q99990 AC244505.4-201ENST00000434905 287 ntBASIC2.56□□□□□ -2
VGLL1Q99990 SSXP5-201ENST00000443473 287 ntBASIC2.56□□□□□ -2
VGLL1Q99990 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.56□□□□□ -2
VGLL1Q99990 AC104058.1-201ENST00000448028 297 ntBASIC2.56□□□□□ -2
VGLL1Q99990 SNORD105B-201ENST00000458770 79 ntBASIC2.56□□□□□ -2
VGLL1Q99990 U3.44-201ENST00000458938 192 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RPL7P43-201ENST00000478876 753 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC012181.1-201ENST00000479895 423 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RPL31P13-201ENST00000484151 370 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC002456.2-201ENST00000509356 380 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.56□□□□□ -2
VGLL1Q99990 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.56□□□□□ -2
VGLL1Q99990 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.56□□□□□ -2
VGLL1Q99990 Y_RNA.675-201ENST00000516389 149 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RNU6-1153P-201ENST00000516760 105 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RNU6-1088P-201ENST00000516850 104 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC104027.1-201ENST00000521887 300 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.56□□□□□ -2
VGLL1Q99990 RANP3-201ENST00000530970 276 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.56□□□□□ -2
VGLL1Q99990 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.56□□□□□ -2
VGLL1Q99990 AC090115.3-201ENST00000553218 849 ntBASIC2.56□□□□□ -2
VGLL1Q99990 MED28P6-201ENST00000558776 231 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.56□□□□□ -2
VGLL1Q99990 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.56□□□□□ -2
VGLL1Q99990 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.56□□□□□ -2
VGLL1Q99990 BDH2P1-201ENST00000602288 736 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AL670379.10-201ENST00000604330 253 ntBASIC2.56□□□□□ -2
VGLL1Q99990 AL670379.9-201ENST00000605428 253 ntBASIC2.56□□□□□ -2
VGLL1Q99990 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.56□□□□□ -2
VGLL1Q99990 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.56□□□□□ -2
VGLL1Q99990 AC007742.2-201ENST00000618226 398 ntBASIC2.56□□□□□ -2
VGLL1Q99990 RMST_7.1-201ENST00000621935 268 ntBASIC2.56□□□□□ -2
VGLL1Q99990 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.56□□□□□ -2
VGLL1Q99990 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms