Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SDCBPP3-201ENST00000419629 891 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKP4Q99569 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC009237.8-201ENST00000445492 379 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.19□□□□□ -1.9
PKP4Q99569 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 GMFBP1-201ENST00000467831 427 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PKP4Q99569 EIF4EP3-201ENST00000498782 656 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 RNU7-51P-201ENST00000516560 62 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP4Q99569 OR5B19P-201ENST00000531766 928 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC128657.1-201ENST00000549459 145 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.19□□□□□ -1.9
PKP4Q99569 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC010525.2-201ENST00000590920 195 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC090132.2-201ENST00000615881 347 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP4Q99569 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.19□□□□□ -1.9
PKP4Q99569 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PKP4Q99569 AC010680.1-201ENST00000590024 3590 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PKP4Q99569 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKP4Q99569 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PKP4Q99569 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKP4Q99569 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PKP4Q99569 RNU1-75P-201ENST00000347264 129 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 SNORA63.1-201ENST00000362493 131 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 RNU4-73P-201ENST00000363164 141 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 Y_RNA.166-201ENST00000363730 102 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 RNA5SP72-201ENST00000364442 117 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 SNORA36C-201ENST00000384289 132 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 Y_RNA.529-201ENST00000384586 119 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 OR2AS1P-201ENST00000427827 319 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
PKP4Q99569 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.18□□□□□ -1.9
PKP4Q99569 AC016696.1-201ENST00000446949 318 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC073415.1-201ENST00000449240 153 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC126389.1-201ENST00000477436 290 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP4Q99569 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
PKP4Q99569 HMGN1P28-201ENST00000521340 364 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 SUB1P1-201ENST00000524415 382 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP4Q99569 AC243972.3-201ENST00000539655 198 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP4Q99569 HIGD1AP1-201ENST00000550979 275 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC125611.2-201ENST00000551907 647 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP4Q99569 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.18□□□□□ -1.9
PKP4Q99569 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP4Q99569 RPS3AP23-202ENST00000574601 686 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.18□□□□□ -1.9
PKP4Q99569 VN1R80P-201ENST00000597126 338 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP4Q99569 AC016727.1-205ENST00000605437 569 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AL121992.2-201ENST00000606262 256 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.18□□□□□ -1.9
PKP4Q99569 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 MTND1P37-201ENST00000636562 264 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC112487.2-201ENST00000637950 304 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 AC100810.6-201ENST00000638068 285 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
PKP4Q99569 OR4G1P-203ENST00000641984 1631 ntBASIC3.18□□□□□ -1.9
PKP4Q99569 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
PKP4Q99569 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PKP4Q99569 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PKP4Q99569 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKP4Q99569 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PKP4Q99569 RNA5SP139-201ENST00000364340 117 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKP4Q99569 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKP4Q99569 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKP4Q99569 RNU6-1027P-201ENST00000383998 107 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 RNU6-432P-201ENST00000384196 109 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 MIR514A1-201ENST00000385133 98 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 RNU6-754P-201ENST00000391166 107 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 AL162578.1-201ENST00000406202 378 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.17□□□□□ -1.9
PKP4Q99569 AC018630.2-202ENST00000422992 927 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 AC008850.1-201ENST00000427546 362 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
PKP4Q99569 SRIP2-201ENST00000428470 166 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms