Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC008739.2-201ENST00000597006 317 ntBASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 SNRPGP15-201ENST00000600149 222 ntBASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 ELOCP34-201ENST00000604436 327 ntBASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 UBE2V2P3-201ENST00000433562 437 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 CABYRP1-201ENST00000465493 1045 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 EIF4EP3-201ENST00000498782 656 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 AC098862.1-201ENST00000504991 413 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 AL357075.2-201ENST00000614906 189 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 RNU6-939P-201ENST00000384634 107 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 RNU6-1077P-201ENST00000410506 102 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 ARL2BPP3-201ENST00000421226 480 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 AC079448.1-201ENST00000449377 373 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 AP001180.6-201ENST00000584918 159 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 AC078899.2-201ENST00000595282 212 ntBASIC0.34□□□□□ -2.36
CSMD1Q96PZ7 RNU6-1184P-201ENST00000384588 108 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 MTCO2P32-201ENST00000514865 403 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 RNU6-1004P-201ENST00000516584 111 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 ELOCP6-201ENST00000429066 328 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AL157398.1-201ENST00000452981 186 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 ELOCP12-201ENST00000458706 328 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AC093770.1-201ENST00000511559 571 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AC023824.2-201ENST00000566185 400 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 AC002545.1-201ENST00000592511 181 ntBASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CSMD1Q96PZ7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 RNU1-72P-201ENST00000362976 153 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 RNY4P6-201ENST00000363667 96 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 MTND2P2-201ENST00000434633 945 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 FAM206BP-201ENST00000510179 541 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 MTCO2P22-201ENST00000603246 681 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AC110079.1-202ENST00000635213 138 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AC055731.1-201ENST00000474387 401 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 RPS27P22-201ENST00000478056 241 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AC106791.2-201ENST00000604680 391 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AP003476.1-201ENST00000623984 516 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 MIR214-201ENST00000385214 110 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 RNU6-889P-201ENST00000517189 103 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 AP001485.1-201ENST00000604799 199 ntBASIC0.32□□□□□ -2.36
CSMD1Q96PZ7 MIR126-201ENST00000362291 85 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 Y_RNA.495-201ENST00000384435 112 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 RNU6-1072P-201ENST00000384703 107 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 RNU6-443P-201ENST00000384780 107 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 RPS4XP3-201ENST00000398541 413 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 SNORA3A-201ENST00000364113 130 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 SFR1P2-201ENST00000421841 730 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 TOMM22P2-201ENST00000430735 237 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 NUTF2P8-201ENST00000604593 363 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 Y_RNA.583-201ENST00000391033 113 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 MTND4P6-201ENST00000438297 472 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC139453.3-201ENST00000493276 369 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC008834.1-201ENST00000511612 175 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC068714.1-201ENST00000559623 800 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 MIR4529-201ENST00000578110 78 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 AC104763.3-201ENST00000613765 618 ntBASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CSMD1Q96PZ7 HSBP1P2-201ENST00000299671 229 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 Y_RNA.52-201ENST00000362760 96 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 PRR13P7-201ENST00000605538 430 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AC021146.2-201ENST00000504736 556 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 LSM6P2-201ENST00000552208 177 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AL355472.4-201ENST00000610233 626 ntBASIC0.3□□□□□ -2.36
CSMD1Q96PZ7 AC083875.1-201ENST00000419509 405 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms