Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NEK1Q96PY6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NEK1Q96PY6 CDK8P2-201ENST00000415020 547 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 Z85995.1-201ENST00000415547 335 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AL512844.2-201ENST00000433990 593 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AC010099.1-201ENST00000455434 375 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 TRBV12-1-201ENST00000479785 344 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 RN7SKP258-201ENST00000517151 304 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AL451064.1-201ENST00000607718 471 ntBASIC3.13□□□□□ -1.91
NEK1Q96PY6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NEK1Q96PY6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEK1Q96PY6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NEK1Q96PY6 RNU5E-6P-201ENST00000365574 115 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEK1Q96PY6 Y_RNA.436-201ENST00000384097 102 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NEK1Q96PY6 DEFB108C-201ENST00000400154 252 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL513477.1-202ENST00000417061 214 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 RPL31P35-201ENST00000431058 377 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL513124.1-201ENST00000450410 614 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 KLF3P2-201ENST00000465138 268 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 RPS20P22-201ENST00000473700 357 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 UBL5P3-201ENST00000475112 231 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 RNU7-51P-201ENST00000516560 62 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 HMGB1P41-201ENST00000520234 440 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC022616.3-201ENST00000523940 148 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 MIR3167-201ENST00000579623 85 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 NRBF2P1-201ENST00000587407 859 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC010620.2-201ENST00000600135 313 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.6-201ENST00000603753 252 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.11-201ENST00000604059 253 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL161729.4-201ENST00000604650 476 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC008162.1-201ENST00000604718 254 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.1-201ENST00000604752 252 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.5-201ENST00000605253 252 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.12-201ENST00000605291 253 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.8-201ENST00000605353 252 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL670379.7-201ENST00000605823 252 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 MIR98-201ENST00000606724 119 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL161629.2-201ENST00000615347 275 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC009509.4-201ENST00000619202 509 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AC092656.1-203ENST00000624134 423 ntBASIC3.12□□□□□ -1.91
NEK1Q96PY6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.12□□□□□ -1.91
NEK1Q96PY6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NEK1Q96PY6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NEK1Q96PY6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEK1Q96PY6 RNU6-188P-201ENST00000364207 107 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 RNU6-39P-201ENST00000384344 107 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 MIR196B-201ENST00000384852 84 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 HMGB1P27-201ENST00000431429 603 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 Z82210.1-201ENST00000440037 231 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC011816.1-201ENST00000441346 546 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 NEFMP1-201ENST00000443423 1006 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 CACYBPP2-201ENST00000453625 678 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 MTCO2P18-201ENST00000457151 658 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC126389.1-201ENST00000477436 290 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEK1Q96PY6 RNU6-927P-201ENST00000516199 100 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 AP006587.4-201ENST00000526053 529 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 AP002963.1-201ENST00000530590 184 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.11□□□□□ -1.91
NEK1Q96PY6 ELOCP31-201ENST00000540463 467 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC087883.1-201ENST00000551882 391 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 AC024909.2-201ENST00000553035 286 ntBASIC3.11□□□□□ -1.91
NEK1Q96PY6 TRAV28-201ENST00000557548 323 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms