Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CALR3Q96L12 RN7SKP15-201ENST00000364742 309 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RNU1-100P-201ENST00000365255 165 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 MIR223-201ENST00000385204 110 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 MT-TR-201ENST00000387439 65 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CALR3Q96L12 HSPE1P12-201ENST00000412576 301 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RAB9AP3-201ENST00000412737 573 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 EIF1AXP1-201ENST00000419267 435 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AL358453.1-201ENST00000422522 250 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RPL21P40-201ENST00000428586 483 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 CYCSP32-201ENST00000440548 321 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RPL34P20-201ENST00000442771 351 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RAB9AP1-201ENST00000449393 573 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.08□□□□□ -1.6
CALR3Q96L12 LINC01399-202ENST00000458450 244 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RN7SL817P-201ENST00000480777 288 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AC093270.2-201ENST00000486157 792 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RPL7P51-201ENST00000490532 749 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 ANXA2P1-201ENST00000505539 926 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RNU1-61P-201ENST00000516107 151 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AP003733.2-201ENST00000529409 171 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 MRPS36P4-201ENST00000534436 298 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AC092490.3-201ENST00000545370 572 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AC011602.1-201ENST00000546484 331 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 NACAP3-201ENST00000552100 481 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AL591926.8-201ENST00000616876 211 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 SCARNA4-201ENST00000629045 128 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 AL049767.1-202ENST00000637826 242 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.08□□□□□ -1.6
CALR3Q96L12 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CALR3Q96L12 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CALR3Q96L12 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CALR3Q96L12 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.07□□□□□ -1.6
CALR3Q96L12 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.07□□□□□ -1.6
CALR3Q96L12 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CALR3Q96L12 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CALR3Q96L12 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.07□□□□□ -1.6
CALR3Q96L12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.07□□□□□ -1.6
CALR3Q96L12 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 RNA5SP44-201ENST00000410446 133 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 RNU6-130P-201ENST00000411112 103 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.07□□□□□ -1.6
CALR3Q96L12 RPL23AP22-201ENST00000437556 453 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.07□□□□□ -1.6
CALR3Q96L12 RPS27AP10-201ENST00000496103 208 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 RNU1-6P-201ENST00000516290 144 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 RNU6-928P-201ENST00000516876 104 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 CR383656.8-201ENST00000549046 145 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.07□□□□□ -1.6
CALR3Q96L12 AC091979.2-201ENST00000607514 214 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.07□□□□□ -1.6
CALR3Q96L12 RLIMP1-201ENST00000339626 1680 ntBASIC5.07□□□□□ -1.6
CALR3Q96L12 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CALR3Q96L12 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CALR3Q96L12 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.07□□□□□ -1.6
CALR3Q96L12 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CALR3Q96L12 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.06□□□□□ -1.6
CALR3Q96L12 RNU6-1286P-201ENST00000383871 107 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 Y_RNA.458-201ENST00000384240 102 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 MIR195-201ENST00000385194 87 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 RNA5SP372-201ENST00000390836 115 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 AL049745.1-201ENST00000433953 286 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 Z82188.1-201ENST00000436709 154 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 AC069285.2-201ENST00000440210 275 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.06□□□□□ -1.6
CALR3Q96L12 AL031659.1-201ENST00000447075 539 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 AL353705.4-201ENST00000449661 238 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.06□□□□□ -1.6
CALR3Q96L12 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.06□□□□□ -1.6
CALR3Q96L12 RPL26P9-201ENST00000457466 433 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 COPS8P2-201ENST00000473228 627 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 RN7SL41P-201ENST00000476144 297 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 RN7SL30P-201ENST00000488416 306 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 RPL23AP75-201ENST00000491601 451 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 AC067942.3-201ENST00000512025 362 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 AP002770.2-201ENST00000543613 532 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 AL110118.1-201ENST00000553543 400 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.06□□□□□ -1.6
CALR3Q96L12 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.06□□□□□ -1.6
CALR3Q96L12 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.06□□□□□ -1.6
CALR3Q96L12 AL451007.1-201ENST00000595491 289 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 AL355877.2-201ENST00000603670 358 ntBASIC5.06□□□□□ -1.6
CALR3Q96L12 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.06□□□□□ -1.6
CALR3Q96L12 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.06□□□□□ -1.6
CALR3Q96L12 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CALR3Q96L12 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.05□□□□□ -1.6
CALR3Q96L12 AC125257.1-201ENST00000560400 2930 ntBASIC5.05□□□□□ -1.6
CALR3Q96L12 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CALR3Q96L12 RN7SKP104-201ENST00000362605 328 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms