Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNA5SP445-201ENST00000515889 115 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 RNU6-390P-201ENST00000516259 103 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC022634.1-201ENST00000520765 532 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.32□□□□□ -2.04
USP47Q96K76 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.32□□□□□ -2.04
USP47Q96K76 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.32□□□□□ -2.04
USP47Q96K76 MTND3P19-201ENST00000603825 345 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AF129408.1-201ENST00000608767 431 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC245297.2-201ENST00000610119 565 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC107075.1-201ENST00000613695 314 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 uc_338.20-201ENST00000621563 178 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AL049777.1-201ENST00000622740 518 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC068057.2-201ENST00000624047 895 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AP000720.1-201ENST00000625091 483 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 AC135776.4-201ENST00000624300 1904 ntBASIC2.32□□□□□ -2.04
USP47Q96K76 MAPK10-266ENST00000641066 6555 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP47Q96K76 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 Y_RNA.40-201ENST00000362645 93 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.31□□□□□ -2.04
USP47Q96K76 RN7SKP101-201ENST00000411376 320 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 USP9YP13-201ENST00000417797 480 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 RPS25P9-201ENST00000435591 252 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 RPS15AP5-201ENST00000436276 388 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.31□□□□□ -2.04
USP47Q96K76 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.31□□□□□ -2.04
USP47Q96K76 RPL21P134-201ENST00000453468 483 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 SSXP1-201ENST00000453640 473 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AC005410.1-202ENST00000460347 485 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 RPL36AP21-201ENST00000490372 323 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AL160314.1-201ENST00000490836 438 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 OR4R1P-201ENST00000529879 463 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.31□□□□□ -2.04
USP47Q96K76 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.31□□□□□ -2.04
USP47Q96K76 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.31□□□□□ -2.04
USP47Q96K76 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.31□□□□□ -2.04
USP47Q96K76 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.31□□□□□ -2.04
USP47Q96K76 MIR502-201ENST00000606349 86 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AL121652.1-201ENST00000608851 448 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AL133445.2-201ENST00000611191 527 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.31□□□□□ -2.04
USP47Q96K76 PABPC1P9-201ENST00000426076 1612 ntBASIC2.31□□□□□ -2.04
USP47Q96K76 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP47Q96K76 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP47Q96K76 RNU6-853P-201ENST00000364306 107 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 MIR888-201ENST00000401186 77 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 MIR320C1-201ENST00000408566 88 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 RNU2-49P-201ENST00000410666 184 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 BTF3L4P3-201ENST00000418879 476 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 HMGN2P38-201ENST00000423806 265 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 Z80107.1-201ENST00000436830 412 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 SNRPGP9-201ENST00000456025 225 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 RNU7-95P-201ENST00000459222 64 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 AC090096.1-201ENST00000489168 390 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.3□□□□□ -2.04
USP47Q96K76 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP47Q96K76 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.3□□□□□ -2.04
USP47Q96K76 MTCYBP23-201ENST00000558717 1102 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USP47Q96K76 AC060771.1-201ENST00000582031 164 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 AP001269.3-201ENST00000588718 329 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 APOOP1-201ENST00000604695 592 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 AL158050.2-201ENST00000605336 568 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.3□□□□□ -2.04
USP47Q96K76 AC239868.4-201ENST00000608318 671 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 Z82209.1-201ENST00000422141 2135 ntBASIC2.3□□□□□ -2.04
USP47Q96K76 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
USP47Q96K76 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP47Q96K76 AC009902.3-201ENST00000606235 2172 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 ZNF876P-202ENST00000398732 1485 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP47Q96K76 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.29□□□□□ -2.04
USP47Q96K76 RNU4-22P-201ENST00000411058 166 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.29□□□□□ -2.04
USP47Q96K76 MTCO1P27-201ENST00000448269 226 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.29□□□□□ -2.04
USP47Q96K76 AC107626.1-201ENST00000471084 183 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.29□□□□□ -2.04
USP47Q96K76 SNORA31.18-201ENST00000517043 134 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 AC023538.1-201ENST00000534576 736 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.29□□□□□ -2.04
USP47Q96K76 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.29□□□□□ -2.04
USP47Q96K76 AC023813.2-201ENST00000564321 469 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 AC009712.1-201ENST00000564938 316 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 AC093536.2-201ENST00000565257 1406 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USP47Q96K76 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP47Q96K76 MTND4P23-201ENST00000447723 1363 ntBASIC2.29□□□□□ -2.04
USP47Q96K76 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.29□□□□□ -2.04
USP47Q96K76 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP47Q96K76 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
USP47Q96K76 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.28□□□□□ -2.04
USP47Q96K76 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.28□□□□□ -2.04
USP47Q96K76 MTCO3P45-201ENST00000443036 613 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms