Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC003071.1-201ENST00000451219 789 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC097462.2-201ENST00000504623 481 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 MRPS33P3-201ENST00000513456 322 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 RNA5SP337-201ENST00000517007 109 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AL133241.1-201ENST00000556832 487 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC012435.1-202ENST00000568772 240 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 LARP7P3-201ENST00000579888 337 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 MIR15A-201ENST00000607334 83 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 MIR6895-201ENST00000613497 78 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC104010.1-201ENST00000616889 150 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC010338.1-201ENST00000621823 717 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AL137790.1-201ENST00000634283 177 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 Z75746.1-201ENST00000440243 2080 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VMP1Q96GC9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VMP1Q96GC9 SNORD56.2-201ENST00000363242 71 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 RNU5F-7P-201ENST00000363696 115 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 RNU6-7-201ENST00000364784 107 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 RNU6-8-201ENST00000365467 107 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 Y_RNA.608-201ENST00000410647 95 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 RNU4-72P-201ENST00000410754 173 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC092809.3-201ENST00000415453 231 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 RPL23AP30-201ENST00000432419 501 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 MTND5P2-201ENST00000442927 1142 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 IFNA11P-201ENST00000446352 526 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.7□□□□□ -1.98
VMP1Q96GC9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.7□□□□□ -1.98
VMP1Q96GC9 RPS29P26-201ENST00000477483 171 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC090525.1-201ENST00000479116 478 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC007182.2-201ENST00000489251 402 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.7□□□□□ -1.98
VMP1Q96GC9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
VMP1Q96GC9 MIR5697-201ENST00000578045 78 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC090115.4-201ENST00000609970 188 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC027807.2-201ENST00000616099 408 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 MIR7844-201ENST00000616161 122 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC006386.2-201ENST00000624491 75 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 AC012005.1-201ENST00000624575 75 ntBASIC2.7□□□□□ -1.98
VMP1Q96GC9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VMP1Q96GC9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VMP1Q96GC9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VMP1Q96GC9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC073343.1-201ENST00000328239 651 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 RNU6-395P-201ENST00000365662 106 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 MIR592-201ENST00000384959 97 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC010099.3-201ENST00000423896 409 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 EIF4EP4-201ENST00000424916 578 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AL591719.1-201ENST00000444669 744 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 RPL7P12-201ENST00000446719 750 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 FABP5P13-201ENST00000452144 328 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VMP1Q96GC9 RPS3AP22-201ENST00000488297 769 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC010587.1-201ENST00000505809 469 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 HMGB1P41-201ENST00000520234 440 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 EIF4BP1-201ENST00000554881 351 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AL645944.1-201ENST00000603857 493 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 SNORD14A-201ENST00000606526 91 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AP002360.4-201ENST00000606980 481 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AL031775.1-201ENST00000607014 887 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC138627.2-201ENST00000624202 601 ntBASIC2.69□□□□□ -1.98
VMP1Q96GC9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VMP1Q96GC9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.69□□□□□ -1.98
VMP1Q96GC9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VMP1Q96GC9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC138393.1-203ENST00000327086 343 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 RNU6-166P-201ENST00000384371 107 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 MIR518D-201ENST00000385014 87 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC009518.2-201ENST00000418056 731 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 UBE2D3P1-201ENST00000436669 444 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC011005.2-201ENST00000487324 359 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms