Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC233263.6-201ENST00000631132 1963 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC244517.1-201ENST00000606030 2086 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHFRQ96EP1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHFRQ96EP1 Y_RNA.106-201ENST00000363189 100 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RNA5SP51-201ENST00000364750 119 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RNU1-115P-201ENST00000365329 160 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RNY3P13-201ENST00000365542 102 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 MIR199A2-201ENST00000385289 110 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC016769.3-201ENST00000396562 315 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL356421.1-201ENST00000403255 413 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 MIR548I2-201ENST00000408348 149 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 MIR1251-201ENST00000408552 70 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 PGBD4P6-201ENST00000421501 610 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RPL21P66-201ENST00000426566 466 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 AP000907.1-201ENST00000428428 510 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC093156.1-201ENST00000440382 670 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC005297.2-201ENST00000450430 606 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 MTCO3P2-201ENST00000457365 171 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 SNRPFP3-201ENST00000457792 225 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RN7SL585P-201ENST00000470538 280 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RPL21P93-201ENST00000480465 489 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC006517.1-201ENST00000480485 328 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RPL7P47-201ENST00000497299 556 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC116562.3-201ENST00000506136 177 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC008526.1-201ENST00000509149 338 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC025465.3-201ENST00000510570 311 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 Y_RNA.670-201ENST00000516255 105 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 RNU6-1016P-201ENST00000516689 94 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC068587.5-201ENST00000528506 175 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 MIR3910-1-201ENST00000580936 111 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC078899.3-201ENST00000599065 212 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL355297.3-201ENST00000604082 446 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 SNORD58B-201ENST00000607313 66 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC009229.3-201ENST00000608056 282 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL021879.1-201ENST00000611756 288 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AC243312.2-201ENST00000623340 601 ntBASIC3.95□□□□□ -1.78
CHFRQ96EP1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHFRQ96EP1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CHFRQ96EP1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
CHFRQ96EP1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHFRQ96EP1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHFRQ96EP1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 AL161781.1-201ENST00000354277 403 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU6-490P-201ENST00000362985 107 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU6-774P-201ENST00000363238 107 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 Y_RNA.210-201ENST00000364161 110 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 Y_RNA.222-201ENST00000364264 102 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU6-593P-201ENST00000364716 112 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU6-921P-201ENST00000384361 107 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RPL21P1-201ENST00000399532 476 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 POLHP1-201ENST00000411806 470 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RPS29P4-201ENST00000414733 161 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC139712.2-201ENST00000424302 339 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 MED13P1-201ENST00000428342 171 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 MTND5P15-201ENST00000434246 349 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 PRDX3P3-201ENST00000447765 522 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC087879.1-201ENST00000474343 374 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC106707.2-201ENST00000484182 374 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 HMGN1P11-201ENST00000508668 303 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU6-138P-201ENST00000515952 107 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU6-1023P-201ENST00000516137 106 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNU7-51P-201ENST00000516560 62 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 RNA5SP503-201ENST00000517047 117 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC131281.1-201ENST00000522984 164 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 OR4P1P-201ENST00000530808 1136 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHFRQ96EP1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 MIR3200-201ENST00000580767 85 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 MIR5187-201ENST00000583479 76 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC092447.9-201ENST00000603395 144 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC092747.3-201ENST00000603769 301 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AC096577.2-201ENST00000611455 153 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 MIR8058-201ENST00000615737 89 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms