Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.19□□□□□ -1.74
ERCC4Q92889 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AC007151.1-201ENST00000572774 483 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 BNIP3P22-201ENST00000593399 556 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.19□□□□□ -1.74
ERCC4Q92889 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC4Q92889 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.18□□□□□ -1.74
ERCC4Q92889 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC4Q92889 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC4Q92889 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.18□□□□□ -1.74
ERCC4Q92889 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ERCC4Q92889 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC4Q92889 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC4Q92889 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC4Q92889 RNU6-1188P-201ENST00000363795 107 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 RNA5SP97-201ENST00000365006 84 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 RNA5SP283-201ENST00000365604 119 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC4Q92889 RNU6-213P-201ENST00000384051 104 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 MIR450B-201ENST00000401182 78 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 RNU6-954P-201ENST00000411355 107 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 Z82205.1-201ENST00000428456 297 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 AL591212.2-201ENST00000433923 257 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 AC117503.1-201ENST00000472241 394 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.18□□□□□ -1.74
ERCC4Q92889 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 CYCSP27-201ENST00000527643 293 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC4Q92889 OR5D17P-201ENST00000531492 978 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.18□□□□□ -1.74
ERCC4Q92889 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 ZNF192P1-203ENST00000565888 810 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 AC138761.3-201ENST00000579993 334 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 SNORD84-203ENST00000584275 78 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC4Q92889 MIR15A-201ENST00000607334 83 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 AC034102.8-201ENST00000615146 484 ntBASIC4.18□□□□□ -1.74
ERCC4Q92889 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC4Q92889 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC4Q92889 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC4Q92889 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.17□□□□□ -1.74
ERCC4Q92889 MTND4P27-201ENST00000450813 1354 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.17□□□□□ -1.74
ERCC4Q92889 MIR369-201ENST00000362155 70 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 RNU6-288P-201ENST00000363690 104 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 Y_RNA.482-201ENST00000384377 111 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 MIR559-201ENST00000385188 96 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AL139039.1-201ENST00000401900 692 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 RNU6-370P-201ENST00000411008 104 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AL513331.1-201ENST00000411908 397 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 RPL17P36-201ENST00000420302 549 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 MTND2P23-201ENST00000422990 651 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 RPS29P31-201ENST00000446147 164 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 RPS24P6-201ENST00000452670 400 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 Y_RNA.631-201ENST00000459607 101 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC087588.1-201ENST00000462203 316 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC087884.1-201ENST00000469738 328 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC010285.1-201ENST00000470580 392 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.17□□□□□ -1.74
ERCC4Q92889 RPS27P27-201ENST00000498779 255 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 VN1R104P-201ENST00000505115 1009 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ERCC4Q92889 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.17□□□□□ -1.74
ERCC4Q92889 GMPSP1-201ENST00000514075 579 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 Y_RNA.711-201ENST00000516993 102 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 AL355836.1-201ENST00000555951 870 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.17□□□□□ -1.74
ERCC4Q92889 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
ERCC4Q92889 MIR4738-201ENST00000579134 87 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.17□□□□□ -1.74
ERCC4Q92889 KLKP1-201ENST00000595979 403 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AL360085.1-201ENST00000604713 532 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC080078.3-201ENST00000605407 463 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.17□□□□□ -1.74
ERCC4Q92889 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ERCC4Q92889 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ERCC4Q92889 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ERCC4Q92889 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ERCC4Q92889 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ERCC4Q92889 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC4Q92889 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ERCC4Q92889 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC4Q92889 Y_RNA.187-201ENST00000363918 113 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 RNU6-128P-201ENST00000383976 107 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 RNU6-738P-201ENST00000384531 106 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ERCC4Q92889 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.16□□□□□ -1.74
ERCC4Q92889 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms