Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 TRGVB-201ENST00000453257 471 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.66□□□□□ -2.14
TOPBP1Q92547 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.66□□□□□ -2.14
TOPBP1Q92547 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.66□□□□□ -2.14
TOPBP1Q92547 RNU5A-7P-201ENST00000515979 116 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 RNA5SP330-201ENST00000517096 96 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.66□□□□□ -2.14
TOPBP1Q92547 AC104229.1-201ENST00000561364 255 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.66□□□□□ -2.14
TOPBP1Q92547 MIR3616-201ENST00000584070 92 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.66□□□□□ -2.14
TOPBP1Q92547 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TOPBP1Q92547 MIR6857-201ENST00000613267 93 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 AC090132.2-201ENST00000615881 347 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 AL162373.1-201ENST00000620433 407 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 AC073308.1-201ENST00000623696 305 ntBASIC1.66□□□□□ -2.14
TOPBP1Q92547 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
TOPBP1Q92547 AL390862.1-201ENST00000635467 1469 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 AC092047.1-201ENST00000424997 240 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.65□□□□□ -2.15
TOPBP1Q92547 DYNLL1P5-201ENST00000467158 270 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 AC118282.2-201ENST00000508739 374 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 AP003066.2-201ENST00000529375 555 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.65□□□□□ -2.15
TOPBP1Q92547 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.65□□□□□ -2.15
TOPBP1Q92547 AL590095.2-201ENST00000604136 117 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.65□□□□□ -2.15
TOPBP1Q92547 AC006213.5-201ENST00000619673 288 ntBASIC1.65□□□□□ -2.15
TOPBP1Q92547 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 AL049641.1-201ENST00000441055 1948 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 MTND4P27-201ENST00000450813 1354 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC009902.3-201ENST00000606235 2172 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 OR1L1-202ENST00000373686 1083 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 RNU6-878P-201ENST00000384578 110 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 RNU6-883P-201ENST00000384597 107 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 VN1R42P-201ENST00000424651 344 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 GPM6BP3-201ENST00000442797 145 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 DDX3P2-201ENST00000446138 111 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 MTND3P4-201ENST00000453537 303 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC108729.2-201ENST00000476543 840 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC113420.1-201ENST00000507903 571 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.64□□□□□ -2.15
TOPBP1Q92547 AC133794.1-201ENST00000602731 914 ntBASIC1.64□□□□□ -2.15
TOPBP1Q92547 RNU5A-1-201ENST00000362698 116 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 MIR1285-1-201ENST00000408593 84 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 AC015922.2-201ENST00000435593 184 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 SDCBPP1-201ENST00000440192 890 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 FGF7P5-201ENST00000441829 291 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TOPBP1Q92547 AL353691.1-201ENST00000451332 387 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 AC078857.1-201ENST00000469870 667 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 NDUFB4P2-201ENST00000509515 391 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 AC022483.1-201ENST00000514020 567 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.63□□□□□ -2.15
TOPBP1Q92547 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.63□□□□□ -2.15
TOPBP1Q92547 IMMP1LP2-201ENST00000552954 492 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 AC107214.2-201ENST00000608204 634 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 AC080100.1-201ENST00000624239 5356 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 AL137003.2-201ENST00000606924 2538 ntBASIC1.63□□□□□ -2.15
TOPBP1Q92547 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TOPBP1Q92547 RNU6-492P-201ENST00000363035 104 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 MIR513A1-201ENST00000385138 129 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 SNORA46.1-201ENST00000391069 153 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AL356131.1-201ENST00000405826 414 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AL139098.1-201ENST00000407291 389 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 SNORD23.1-201ENST00000408212 104 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 GTF2IP20-201ENST00000431663 360 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 USP12PX-201ENST00000432383 1057 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 AP000949.1-201ENST00000438328 629 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 RNFT1P2-201ENST00000443064 757 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC013828.1-201ENST00000481845 158 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC104685.1-201ENST00000502445 371 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 RNA5SP121-201ENST00000516537 101 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 AGGF1P5-201ENST00000567900 919 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC021749.1-201ENST00000604322 607 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 DUXAP10-204ENST00000612052 616 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC020658.4-201ENST00000613987 684 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 AC091932.3-201ENST00000624223 323 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 AL590396.4-201ENST00000636779 956 ntBASIC1.62□□□□□ -2.15
TOPBP1Q92547 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.62□□□□□ -2.15
TOPBP1Q92547 MTCO2P31-201ENST00000402702 684 ntBASIC1.61□□□□□ -2.15
TOPBP1Q92547 RPS3AP24-201ENST00000407896 734 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms