Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 HMGB3P30-201ENST00000457863 606 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC022493.1-201ENST00000492984 337 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC021146.2-201ENST00000504736 556 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 Y_RNA.661-201ENST00000516003 99 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 SNORA31.8-201ENST00000516327 108 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 RNU6-1046P-201ENST00000516538 107 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 RNU6-1256P-201ENST00000516539 103 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC010653.1-201ENST00000571108 881 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AL591516.1-201ENST00000611326 274 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 7SK.10-201ENST00000621414 298 ntBASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3RF2Q8TEC5 AC116096.1-201ENST00000566804 2314 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 MIR412-201ENST00000362142 91 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 Y_RNA.364-201ENST00000365532 101 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 Y_RNA.428-201ENST00000384078 102 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 SNORA41-201ENST00000384675 132 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 MIR517A-201ENST00000385001 87 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 MIR1251-201ENST00000408552 70 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 SNORA3.3-201ENST00000408712 125 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 RAB9AP3-201ENST00000412737 573 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AC091390.3-201ENST00000426478 338 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 RANP8-201ENST00000444720 713 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 RPL21P23-201ENST00000446654 460 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 HMGN2P21-201ENST00000447764 270 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 RAB9AP1-201ENST00000449393 573 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AP003122.3-201ENST00000526316 255 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AC084851.1-201ENST00000529105 249 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 TRAV37-201ENST00000553906 342 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AC087499.8-201ENST00000578406 226 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 MIR4680-201ENST00000580906 66 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 AP000787.2-201ENST00000604432 568 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 SNORD39.4-201ENST00000620099 78 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 ZNF807-201ENST00000328088 1707 ntBASIC4.07□□□□□ -1.76
SH3RF2Q8TEC5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RNU6-741P-201ENST00000383889 107 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL445529.1-201ENST00000398713 389 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL356057.3-201ENST00000402607 340 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RNU6-1025P-201ENST00000410629 104 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 Z85995.1-201ENST00000415547 335 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 CYP4F29P-201ENST00000420685 446 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 SNRPEP4-201ENST00000435815 279 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 DAP3P1-201ENST00000441522 278 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL358232.1-201ENST00000448030 501 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RNU7-187P-201ENST00000458985 68 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RPL21P11-201ENST00000461458 483 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC018437.1-201ENST00000492214 406 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC022493.2-201ENST00000506122 481 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RNA5SP154-201ENST00000516193 111 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 SCARNA16.2-201ENST00000516520 172 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 RNA5SP290-201ENST00000517133 127 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 SNORD116.3-201ENST00000517176 78 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC104576.1-201ENST00000524225 88 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL139395.1-201ENST00000603662 160 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC106900.2-201ENST00000604994 317 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AL160281.1-201ENST00000605307 311 ntBASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3RF2Q8TEC5 AC006157.1-201ENST00000611750 366 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms