Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNU6-150P-201ENST00000516237 95 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 MTCO2P15-201ENST00000532655 656 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC092451.2-201ENST00000538746 658 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AL512347.1-201ENST00000566420 503 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 UBE2L4-201ENST00000587688 464 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AF038458.1-201ENST00000588406 262 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AL158211.2-201ENST00000607282 395 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC106052.1-201ENST00000608029 497 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC087241.4-201ENST00000612441 480 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC011939.3-201ENST00000613686 466 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AL158801.5-201ENST00000623123 465 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 AC091953.2-201ENST00000623979 160 ntBASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLHC1Q8NHS4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CLHC1Q8NHS4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.84□□□□□ -2.12
CLHC1Q8NHS4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 RNA5SP450-201ENST00000411206 102 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 SNORD56-201ENST00000413522 71 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 UBE2FP1-201ENST00000416536 447 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 PTGES3P4-201ENST00000426243 356 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AL139415.2-201ENST00000431968 163 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC010153.1-201ENST00000432862 727 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 RPL7P12-201ENST00000446719 750 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 CECR9-201ENST00000453421 199 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC079203.1-201ENST00000487972 404 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 RPS15AP36-201ENST00000492022 382 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC008837.2-201ENST00000513076 418 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 SMURF2P1-201ENST00000514992 481 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 RNU6-703P-201ENST00000516946 107 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 MRPS36P5-201ENST00000551909 298 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AL049838.1-201ENST00000563647 981 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC104984.5-201ENST00000586878 94 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 BNIP3P26-201ENST00000600827 554 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC068620.3-201ENST00000602749 560 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AL355598.1-201ENST00000604169 202 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC090186.1-201ENST00000605991 572 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC107308.1-201ENST00000615897 301 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
CLHC1Q8NHS4 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 RNU6-560P-201ENST00000364007 108 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AL139397.2-201ENST00000404529 772 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 MIR1261-201ENST00000408659 82 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AL160275.3-201ENST00000423876 471 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 RPL23AP76-201ENST00000441860 458 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 MTND6P13-201ENST00000443510 523 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AL441985.1-201ENST00000457727 251 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AC008481.1-201ENST00000463278 396 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 HMGB1P35-201ENST00000503360 598 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AC020699.1-201ENST00000505161 445 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 LRRC6P1-201ENST00000532188 885 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 MTND3P13-201ENST00000574391 343 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 NRBF2P1-201ENST00000587407 859 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 DUSP12P1-201ENST00000612874 516 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 AC022202.1-201ENST00000613515 211 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 Z75746.1-201ENST00000440243 2080 ntBASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLHC1Q8NHS4 RNU6-1167P-201ENST00000363227 94 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 SNORA40.19-201ENST00000390846 128 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 RNU2-68P-201ENST00000410878 191 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 BTF3L4P3-201ENST00000418879 476 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 DPH3P2-201ENST00000422618 250 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 ISCA1P1-201ENST00000426679 387 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 AC244035.1-201ENST00000430042 390 ntBASIC1.81□□□□□ -2.12
CLHC1Q8NHS4 SNRPEP7-201ENST00000438350 220 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms