Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL23AP62-201ENST00000463396 453 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RPL21P93-201ENST00000480465 489 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AL049874.1-201ENST00000489560 388 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 UBE2CP3-201ENST00000502715 450 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 BTF3L4P4-201ENST00000506381 449 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC104806.1-201ENST00000508720 308 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP291-201ENST00000517222 105 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 ATP5F1P5-201ENST00000526403 760 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 OR11H5P-201ENST00000554039 926 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC110588.1-201ENST00000559699 137 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC004817.2-201ENST00000561794 651 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 MIR4293-201ENST00000584305 78 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC023043.2-201ENST00000589678 1026 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AL157817.1-201ENST00000614264 790 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC112484.5-201ENST00000624189 228 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AL773545.4-201ENST00000637262 310 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AL513478.4-201ENST00000641636 310 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RLIMP1-201ENST00000339626 1680 ntBASIC3.78□□□□□ -1.81
SIMC1Q8NDZ2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SIMC1Q8NDZ2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MIR372-201ENST00000362225 67 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 Y_RNA.5-201ENST00000362334 102 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-1287P-201ENST00000362914 107 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 SNORD46.1-201ENST00000364139 104 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-1060P-201ENST00000384664 107 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 SNORA1.3-201ENST00000384676 136 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MIR200C-201ENST00000384980 68 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 EIF4E2P1-201ENST00000393781 255 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 SOD2P1-201ENST00000396543 562 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MIR548F4-201ENST00000408515 105 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-985P-201ENST00000410182 104 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RAC1P6-201ENST00000423911 575 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC011742.1-201ENST00000431448 434 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AL160004.2-201ENST00000432935 350 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MTND1P17-201ENST00000448961 204 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 SNORD97-201ENST00000459187 142 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MIR2053-201ENST00000459295 91 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC084357.1-201ENST00000473404 255 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MTCO2P24-201ENST00000515611 426 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-976P-201ENST00000516086 111 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 RANP9-201ENST00000519957 271 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC025627.2-201ENST00000576220 160 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC138761.3-201ENST00000579993 334 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AL355598.1-201ENST00000604169 202 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MIR6868-201ENST00000611215 58 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC012409.4-201ENST00000612923 249 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC098657.3-201ENST00000620434 263 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 AC119674.1-207ENST00000641355 633 ntBASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIMC1Q8NDZ2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 AC007256.1-201ENST00000392253 2765 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 API5P2-201ENST00000397055 1498 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-1318P-201ENST00000365389 103 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 SNORD116-11-201ENST00000383882 92 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-505P-201ENST00000384427 107 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-601P-201ENST00000384540 107 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-310P-201ENST00000384655 107 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 AC093106.2-201ENST00000428212 385 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 AC007389.2-201ENST00000434630 306 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 SETP5-201ENST00000437270 562 ntBASIC3.76□□□□□ -1.81
SIMC1Q8NDZ2 HMGN2P20-201ENST00000437531 273 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms