Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC109347.2-201ENST00000610220 349 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC245517.5-201ENST00000611529 162 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC091304.9-201ENST00000612091 226 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC009159.1-201ENST00000618386 642 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 MIR3199-2-201ENST00000636243 86 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 ELF2P3-201ENST00000445099 1506 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC110491.1-201ENST00000562191 2010 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RNU6-461P-201ENST00000364195 107 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RNU1-109P-201ENST00000383960 147 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RNU1-73P-201ENST00000383971 164 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL356057.2-201ENST00000403318 432 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL513475.1-201ENST00000406602 315 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RPS3AP3-201ENST00000411933 242 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 BPY2DP-201ENST00000422208 265 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC128713.1-201ENST00000471495 306 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RPS27AP10-201ENST00000496103 208 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RNA5SP471-201ENST00000516971 106 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC022616.6-201ENST00000520479 119 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 RPL21P5-201ENST00000554662 472 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 MIR4293-201ENST00000584305 78 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.78□□□□□ -1.96
RTL3Q8N8U3 SEPT7P9-203ENST00000604116 343 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL355598.1-201ENST00000604169 202 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AL589743.7-201ENST00000612637 233 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 AP001506.1-201ENST00000615444 211 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 CR381653.2-201ENST00000624041 768 ntBASIC2.78□□□□□ -1.96
RTL3Q8N8U3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.78□□□□□ -1.97
RTL3Q8N8U3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 UBE2L2-201ENST00000254302 429 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 RNU6-525P-201ENST00000363685 104 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 ELOCP17-201ENST00000414751 326 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 ZNF885P-201ENST00000420174 1098 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 RPL36AP53-201ENST00000432891 316 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC009961.2-201ENST00000435771 251 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 TIMM9P1-201ENST00000436122 256 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 snoU109.1-201ENST00000459339 135 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 RNU1-103P-201ENST00000516502 125 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AP002453.2-201ENST00000533503 320 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AL356432.3-201ENST00000568952 465 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC090616.3-201ENST00000582184 217 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 MIR3117-201ENST00000584034 78 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 HMGN1P30-201ENST00000589286 268 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 KC877982.1-201ENST00000602313 470 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC090578.1-201ENST00000604955 591 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AC087241.4-201ENST00000612441 480 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 Z99129.1-201ENST00000612510 255 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 DUSP12P1-201ENST00000612874 516 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 AL359740.1-201ENST00000624340 592 ntBASIC2.77□□□□□ -1.97
RTL3Q8N8U3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
RTL3Q8N8U3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RTL3Q8N8U3 ASNSP3-201ENST00000451989 1306 ntBASIC2.76□□□□□ -1.97
RTL3Q8N8U3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.76□□□□□ -1.97
RTL3Q8N8U3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.76□□□□□ -1.97
RTL3Q8N8U3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RTL3Q8N8U3 RNU4-1-201ENST00000363925 141 ntBASIC2.76□□□□□ -1.97
RTL3Q8N8U3 RNU6-512P-201ENST00000364438 103 ntBASIC2.76□□□□□ -1.97
RTL3Q8N8U3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms