Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AC068254.2-201ENST00000623938 3577 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-50P-201ENST00000362356 103 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 Y_RNA.319-201ENST00000365138 92 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 U8.10-201ENST00000384260 133 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 SNORA70-201ENST00000384436 135 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 RPL35AP21-201ENST00000437667 333 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 RPS11P7-201ENST00000442125 465 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AC010326.1-201ENST00000462726 602 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AF186190.1-201ENST00000517470 480 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 FAM35BP-202ENST00000497389 3337 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-1141P-201ENST00000364520 107 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-926P-201ENST00000384075 107 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 MIR10B-201ENST00000385011 110 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 MIR589-201ENST00000385238 99 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RN7SKP61-201ENST00000410642 295 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 MTCO1P5-201ENST00000433573 344 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC073901.1-201ENST00000462471 408 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RPL26P26-201ENST00000480251 434 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC016632.1-201ENST00000503994 196 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 NACAP3-201ENST00000552100 481 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC020895.1-201ENST00000595362 272 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC005296.1-201ENST00000616145 209 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 AC074101.1-201ENST00000637861 241 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
DEPDC4Q8N2C3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 HAUS6P2-201ENST00000433254 2404 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-600P-201ENST00000362524 99 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 Y_RNA.76-201ENST00000362931 109 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 Y_RNA.230-201ENST00000364348 109 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-281P-201ENST00000384212 103 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-159P-201ENST00000391080 106 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AC009804.1-201ENST00000400949 179 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RN7SKP216-201ENST00000411050 312 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RN7SL727P-201ENST00000482164 296 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RNA5SP464-201ENST00000516251 108 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AP002392.1-201ENST00000537692 208 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 AL162424.1-201ENST00000602325 221 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 BRDTP1-201ENST00000605735 677 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DEPDC4Q8N2C3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms