Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.89-201ENST00000363031 102 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 SNORA80A-201ENST00000363922 136 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 SNORA62.1-201ENST00000364287 154 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 RNU1-140P-201ENST00000365040 165 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 SNORD115-7-201ENST00000365306 82 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 RNU6-996P-201ENST00000365438 107 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.381-201ENST00000365666 102 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 SNORA69-201ENST00000383895 132 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.573-201ENST00000384763 105 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 RPS20P22-201ENST00000473700 357 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC092989.1-201ENST00000481235 277 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC233702.1-201ENST00000482905 502 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC108078.2-201ENST00000510750 236 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 RN7SKP219-201ENST00000516825 296 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AP005435.4-201ENST00000529514 284 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC034105.3-201ENST00000565294 442 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AL133393.1-201ENST00000603277 287 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC034102.8-201ENST00000615146 484 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC002553.4-201ENST00000616896 331 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 uc_338.11-201ENST00000619132 160 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC011155.2-201ENST00000623202 216 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS52Q8N1B4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.47□□□□□ -1.85
VPS52Q8N1B4 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 Y_RNA.255-201ENST00000364581 97 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL591416.1-201ENST00000404015 867 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 U3.42-201ENST00000408746 214 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL109913.1-201ENST00000421173 514 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 RPL23AP69-201ENST00000431134 458 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 SEPT14P3-201ENST00000439401 183 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL732372.2-207ENST00000445840 183 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC073415.1-201ENST00000449240 153 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 SEPT14P2-201ENST00000453405 183 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC006512.1-201ENST00000468816 291 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 UBE2DNL-203ENST00000474922 222 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL163973.1-201ENST00000484753 577 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 RPL23AP94-201ENST00000512518 302 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 SEPT14P4-201ENST00000513445 186 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 FO082796.1-201ENST00000523795 183 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 OR5AL2P-201ENST00000532185 920 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL133241.1-201ENST00000556832 487 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 MIR4513-201ENST00000581077 86 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC107294.3-201ENST00000609211 526 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AL110115.1-201ENST00000614396 364 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 AC068831.7-201ENST00000616954 363 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 MTND5P42-201ENST00000637720 498 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
VPS52Q8N1B4 API5P2-201ENST00000397055 1498 ntBASIC3.46□□□□□ -1.86
VPS52Q8N1B4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 RNY3P3-201ENST00000363816 102 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 Y_RNA.576-201ENST00000384781 102 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 SNRPEP10-201ENST00000420249 274 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 GTF2IP20-201ENST00000431663 360 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 TAAR7P-201ENST00000436141 242 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 RPL23AP22-201ENST00000437556 453 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 CBWD4P-201ENST00000445695 655 ntBASIC3.45□□□□□ -1.86
VPS52Q8N1B4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS52Q8N1B4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms