Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 SNORA51.11-201ENST00000384442 131 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 RPS24P7-201ENST00000416921 246 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AL109913.1-201ENST00000421173 514 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AL109933.2-201ENST00000452651 260 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 MTATP6P7-201ENST00000453315 681 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC128713.1-201ENST00000471495 306 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC072039.1-201ENST00000477611 581 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC004924.1-201ENST00000480160 781 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 ARL2BPP2-201ENST00000550907 489 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC008121.1-201ENST00000603244 268 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AL358072.1-201ENST00000604156 575 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AP000860.1-201ENST00000605250 559 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC009090.3-201ENST00000616553 565 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AL449363.1-201ENST00000617815 186 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AL031601.2-202ENST00000622650 282 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AP003485.2-201ENST00000623636 610 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 AC007490.1-201ENST00000624321 703 ntBASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-288P-201ENST00000363690 104 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RNU4-28P-201ENST00000364739 141 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC107081.1-201ENST00000414975 361 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC098592.1-201ENST00000419352 333 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RAC1P6-201ENST00000423911 575 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC007560.1-201ENST00000426912 237 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AL592045.1-201ENST00000429867 352 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AP001486.1-201ENST00000463339 476 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 KLF3P2-201ENST00000465138 268 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RN7SL636P-201ENST00000497504 294 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC023141.11-201ENST00000508864 202 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-415P-201ENST00000516252 97 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 RPS3AP4-201ENST00000555161 764 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 MIR3199-1-201ENST00000582434 88 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUDCD3Q8IVD9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-1214P-201ENST00000363650 109 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-188P-201ENST00000364207 107 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-809P-201ENST00000384461 107 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AL355497.1-201ENST00000406262 551 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 RNU2-36P-201ENST00000410361 191 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC005005.2-201ENST00000420779 380 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AL161651.1-201ENST00000440882 223 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 MTND4P25-201ENST00000441039 533 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 RPS3P1-201ENST00000456781 192 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-717P-201ENST00000459076 104 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms