Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 RNU6-510P-201ENST00000391239 108 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AL592114.1-201ENST00000403842 483 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AL591034.1-201ENST00000407447 340 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 RPS29P4-201ENST00000414733 161 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AL451054.2-201ENST00000420896 202 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AF228730.4-201ENST00000421457 183 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 RPL35AP12-201ENST00000425362 338 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 HMGB3P11-201ENST00000440127 604 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 TRBV1-201ENST00000476502 284 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AL049874.1-201ENST00000489560 388 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 HMGN1P13-201ENST00000505795 138 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 APOOP4-201ENST00000513530 597 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 SNORA31.3-201ENST00000516029 96 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 BTF3P12-201ENST00000519620 469 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC022690.1-201ENST00000526681 550 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC004024.1-201ENST00000549244 247 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC005476.1-201ENST00000554427 397 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 MED28P6-201ENST00000558776 231 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 MIR3921-201ENST00000577308 85 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 MIR3922-201ENST00000585192 84 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC006130.2-201ENST00000586202 326 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AL138889.2-201ENST00000603883 242 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC013553.2-201ENST00000604244 589 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC009248.2-201ENST00000619826 254 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 MTND5P42-201ENST00000637720 498 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 AC002546.1-201ENST00000588041 2504 ntBASIC3.47□□□□□ -1.85
RFX6Q8HWS3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.47□□□□□ -1.85
RFX6Q8HWS3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 SNORA32.2-201ENST00000384049 122 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 RNU6-14P-201ENST00000384630 106 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MIR1302-11-201ENST00000408051 138 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MIR1302-9-201ENST00000408365 138 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MIR1302-10-201ENST00000408734 138 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AL513331.1-201ENST00000411908 397 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 YPEL5P1-201ENST00000419731 367 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 RPL31P12-201ENST00000422587 358 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MTCO3P46-201ENST00000425787 232 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC005534.2-201ENST00000431047 433 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 TAAR7P-201ENST00000436141 242 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 RBMY2UP-201ENST00000453474 324 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MTND4LP22-201ENST00000508209 276 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC026403.1-201ENST00000518938 295 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 IGHV3-76-201ENST00000522465 295 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MIR1302-2-201ENST00000607096 138 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AP002826.1-201ENST00000608835 315 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AL132765.2-201ENST00000610812 351 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 AC090574.1-201ENST00000623186 233 ntBASIC3.46□□□□□ -1.86
RFX6Q8HWS3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
RFX6Q8HWS3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms