Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 SNORD42A-201ENST00000459584 64 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 UBE2DNL-203ENST00000474922 222 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC109927.2-201ENST00000506416 303 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC022447.1-201ENST00000515358 464 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 Y_RNA.695-201ENST00000516715 107 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC006199.1-201ENST00000548728 219 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AL157871.3-201ENST00000557231 293 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF39Q86UA1 MIR98-201ENST00000606724 119 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AC069234.5-201ENST00000611056 416 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 AL020991.1-201ENST00000612314 373 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 Z99129.2-201ENST00000619967 314 ntBASIC2.99□□□□□ -1.93
PRPF39Q86UA1 ELL2P3-201ENST00000457883 1602 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC009518.2-201ENST00000418056 731 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC098826.1-201ENST00000433943 471 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 RPS20P5-201ENST00000434808 360 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 RPL36AP6-201ENST00000435770 321 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL161651.1-201ENST00000440882 223 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC009961.3-201ENST00000449832 765 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 GZMAP1-201ENST00000503054 631 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 RNA5SP367-201ENST00000516557 118 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 SNORA31.19-201ENST00000517079 126 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 RNU6-1220P-201ENST00000517126 108 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 ELOCP29-201ENST00000588193 334 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 OR1M4P-201ENST00000589199 287 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC090578.1-201ENST00000604955 591 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL033523.1-201ENST00000605153 153 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AL139286.2-201ENST00000606838 396 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC024940.5-201ENST00000622889 474 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC004520.1-201ENST00000608362 1413 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF39Q86UA1 AC004944.1-201ENST00000517807 3059 ntBASIC2.98□□□□□ -1.93
PRPF39Q86UA1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 TEX21P-201ENST00000447107 1476 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AL139132.1-201ENST00000431587 344 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 NIPA2P5-201ENST00000452282 464 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 TRBV1-201ENST00000476502 284 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC004924.1-201ENST00000480160 781 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 RNU6-123P-201ENST00000516163 102 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 MIR1273C-201ENST00000578669 77 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC040904.1-201ENST00000590850 223 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC005261.5-201ENST00000596280 355 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AC012409.4-201ENST00000612923 249 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 AL158063.1-201ENST00000615349 536 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
PRPF39Q86UA1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRPF39Q86UA1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF39Q86UA1 OR5J1P-201ENST00000313544 939 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RNU1-35P-201ENST00000362782 153 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RNU6-179P-201ENST00000363350 107 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 SNORA68.1-201ENST00000364537 132 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RN7SKP226-201ENST00000364912 300 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RNU6-395P-201ENST00000365662 106 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 SNORA24.1-201ENST00000384401 135 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 RNU6-297P-201ENST00000384636 107 ntBASIC2.96□□□□□ -1.94
PRPF39Q86UA1 MIR181A2-201ENST00000384863 110 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms