Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 RNA5SP383-201ENST00000362934 120 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 RNU6-393P-201ENST00000384475 107 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 U8.11-201ENST00000384699 133 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 U8.12-201ENST00000384701 133 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 MIR578-201ENST00000384828 96 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHFQ7M4L6 RN7SKP111-201ENST00000410349 271 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 BX682237.1-201ENST00000415016 335 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AL645937.1-202ENST00000421799 937 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AL513185.2-201ENST00000425543 193 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 USP9YP8-201ENST00000441913 500 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 RNA5SP310-201ENST00000459084 116 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 U8.18-201ENST00000459285 133 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 Y_RNA.654-201ENST00000497848 106 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC091951.2-201ENST00000500762 203 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC008628.2-201ENST00000502605 298 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 LRRC34P2-201ENST00000514850 553 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 RNU6-1282P-201ENST00000516735 96 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 RNU6-1314P-201ENST00000517139 104 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AL157871.3-201ENST00000557231 293 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 MTCO3P23-201ENST00000561363 289 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC106782.4-201ENST00000568264 210 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 BNIP3P25-201ENST00000596023 559 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHFQ7M4L6 DUSP12P1-201ENST00000612874 516 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 SNORD39.4-201ENST00000620099 78 ntBASIC3.04□□□□□ -1.92
SHFQ7M4L6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHFQ7M4L6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.04□□□□□ -1.92
SHFQ7M4L6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHFQ7M4L6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHFQ7M4L6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHFQ7M4L6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 Y_RNA.70-201ENST00000362886 110 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 RNU6-82P-201ENST00000363970 107 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 Y_RNA.373-201ENST00000365600 103 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 Y_RNA.399-201ENST00000383955 105 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 SNORA75B-201ENST00000384053 137 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 MIR301A-201ENST00000385261 86 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 RN7SKP263-201ENST00000411194 309 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 POLHP1-201ENST00000411806 470 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 RPL21P90-201ENST00000415692 466 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 ARL5AP1-201ENST00000418991 388 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 PRPS1P1-201ENST00000445305 876 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 DYNLL1P5-201ENST00000467158 270 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC083904.1-201ENST00000487828 231 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC022493.1-201ENST00000492984 337 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC093663.1-201ENST00000497190 394 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC104136.1-201ENST00000512969 394 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 RNA5SP165-201ENST00000517142 115 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC107953.1-201ENST00000522216 297 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC090115.3-201ENST00000553218 849 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 MIR1273C-201ENST00000578669 77 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 MIR548AC-201ENST00000585049 88 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC011712.1-201ENST00000588959 234 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC073539.2-201ENST00000597113 165 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC004805.2-201ENST00000605382 482 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 SNORA51-201ENST00000606420 132 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC009994.1-201ENST00000606889 253 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 AC022306.2-201ENST00000617563 647 ntBASIC3.03□□□□□ -1.92
SHFQ7M4L6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.03□□□□□ -1.92
SHFQ7M4L6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
SHFQ7M4L6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.02□□□□□ -1.93
SHFQ7M4L6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.02□□□□□ -1.93
SHFQ7M4L6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHFQ7M4L6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.02□□□□□ -1.93
SHFQ7M4L6 FTLP6-201ENST00000355274 422 ntBASIC3.02□□□□□ -1.93
SHFQ7M4L6 RNU6-217P-201ENST00000384164 104 ntBASIC3.02□□□□□ -1.93
SHFQ7M4L6 RNU6-434P-201ENST00000384376 107 ntBASIC3.02□□□□□ -1.93
SHFQ7M4L6 RNU6-45P-201ENST00000384471 107 ntBASIC3.02□□□□□ -1.93
SHFQ7M4L6 RNU6-140P-201ENST00000384566 108 ntBASIC3.02□□□□□ -1.93
SHFQ7M4L6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SHFQ7M4L6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms