Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC034244.1-201ENST00000507687 207 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 RNU6-889P-201ENST00000517189 103 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 AL138963.2-201ENST00000605137 226 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 AC010889.1-201ENST00000566193 2666 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 AC005832.2-201ENST00000538921 1430 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 RNU5A-1-201ENST00000362698 116 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 MIR135A2-201ENST00000384854 100 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 MIR518A2-201ENST00000384966 87 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 PNRC2P1-201ENST00000423940 420 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 MTND2P29-201ENST00000438595 412 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AC009238.1-201ENST00000442165 424 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 MOB1AP2-201ENST00000446060 614 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AC009237.6-201ENST00000446969 424 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 LARP1BP2-201ENST00000486594 519 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 RNU6-362P-201ENST00000516736 90 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 ZNF705CP-201ENST00000530515 889 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AC233702.2-202ENST00000562547 291 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AL391813.1-201ENST00000603098 260 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AC242628.1-201ENST00000606810 391 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AP000238.1-201ENST00000608759 426 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AP003400.6-201ENST00000624698 740 ntBASIC1.22□□□□□ -2.21
CCDC171Q6TFL3 AC005539.1-201ENST00000443768 1479 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 RNU4-38P-201ENST00000364472 129 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 RNU6-338P-201ENST00000383888 105 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 RNU2-63P-201ENST00000410792 194 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 RNU6-516P-201ENST00000411381 104 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 BEND7P1-201ENST00000422058 457 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 MED14P1-201ENST00000430517 648 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AC241584.1-201ENST00000438469 1241 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AC079448.1-201ENST00000449377 373 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 RFC5P1-201ENST00000454419 874 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 MRPS33P3-201ENST00000513456 322 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 SNORA44.1-201ENST00000517031 108 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AC007151.1-201ENST00000572774 483 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 SNORD39.3-201ENST00000584451 71 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AL121652.1-201ENST00000608851 448 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 AL590396.2-201ENST00000636511 1041 ntBASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC171Q6TFL3 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 RPL21P1-201ENST00000399532 476 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 RNU2-47P-201ENST00000410649 186 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 RPL26P9-201ENST00000457466 433 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 AC139453.3-201ENST00000493276 369 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 AC022483.1-201ENST00000514020 567 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 RNA5SP445-201ENST00000515889 115 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 RNU6-1256P-201ENST00000516539 103 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 AC104997.1-201ENST00000519761 717 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 DUXAP1-201ENST00000556632 463 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC171Q6TFL3 AP000776.1-201ENST00000530032 1663 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 SNORA22-201ENST00000383907 134 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 RNY1P14-201ENST00000384426 108 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 SNORA22C-201ENST00000384614 134 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 EIF4EP2-201ENST00000422816 654 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 AP005660.1-201ENST00000522972 293 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 DUXAP5-201ENST00000529668 529 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 MTND4LP5-201ENST00000605152 292 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 AC022202.1-201ENST00000613515 211 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 MIR6130-201ENST00000619419 109 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 AC092192.1-201ENST00000633154 1018 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 Z99571.1-201ENST00000636677 394 ntBASIC1.19□□□□□ -2.22
CCDC171Q6TFL3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 RNU6-486P-201ENST00000363116 107 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 MIR514A1-201ENST00000385133 98 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 MIR888-201ENST00000401186 77 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 snoU13.18-201ENST00000459483 104 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 MTCO1P31-201ENST00000506355 492 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 AP000907.2-201ENST00000530827 353 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 AL031176.1-201ENST00000604554 466 ntBASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC171Q6TFL3 RNU6-741P-201ENST00000383889 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms