Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 APOOP3-201ENST00000536787 586 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 MIR3672-201ENST00000584290 82 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC008521.1-201ENST00000587471 187 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 DUSP12P1-201ENST00000612874 516 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC010733.2-201ENST00000589496 5702 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNA5SP119-201ENST00000362715 117 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.146-201ENST00000363549 102 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNU6-263P-201ENST00000363811 107 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 MIR1250-201ENST00000408098 113 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RPL21P24-201ENST00000413752 448 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 BEND7P1-201ENST00000422058 457 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 SKA2P1-201ENST00000425592 390 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RPS15AP27-201ENST00000449183 343 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.635-201ENST00000459041 101 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC008155.2-201ENST00000464337 397 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RPL7P23-201ENST00000493874 747 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RBBP4P6-201ENST00000508098 202 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC108078.2-201ENST00000510750 236 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RNU6-566P-201ENST00000516790 107 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC012669.1-201ENST00000603209 283 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AL355812.1-201ENST00000603215 216 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AP000942.4-201ENST00000604811 241 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AL355802.3-201ENST00000607571 545 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AC040896.1-201ENST00000613819 479 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 U6.114-201ENST00000636407 96 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 AP001350.1-201ENST00000601906 1524 ntBASIC3.28□□□□□ -1.88
ZNF549Q6P9A3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 SNORA33.2-201ENST00000365413 134 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 MIR135A2-201ENST00000384854 100 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 RNU4-46P-201ENST00000410818 138 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 POLHP1-201ENST00000411806 470 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC245054.2-201ENST00000415639 319 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 UBE2FP1-201ENST00000416536 447 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 MTCO2P27-201ENST00000420740 428 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 snoU13.3-201ENST00000459441 104 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AP000873.1-201ENST00000463987 400 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AL163540.1-201ENST00000485382 386 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC008739.3-201ENST00000603262 127 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AC006254.3-201ENST00000603353 884 ntBASIC3.27□□□□□ -1.89
ZNF549Q6P9A3 AP001330.4-201ENST00000604350 154 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms