Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.152-201ENST00000363578 100 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 Y_RNA.314-201ENST00000365114 102 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-842P-201ENST00000384269 107 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 PTMAP5-201ENST00000393073 333 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AL358472.1-201ENST00000431295 329 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 HMGN2P31-201ENST00000432430 273 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC008571.1-201ENST00000467232 300 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 RN7SL585P-201ENST00000470538 280 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC025554.1-201ENST00000505641 188 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 MTND3P25-201ENST00000509243 135 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 SNORA70.24-201ENST00000517233 118 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 OR1M4P-201ENST00000589199 287 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC018889.1-201ENST00000605372 397 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC005344.1-201ENST00000613391 459 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 MIR6715B-201ENST00000637172 77 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AC068254.2-201ENST00000623938 3577 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 Z82217.1-201ENST00000625157 8149 ntBASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF40BQ6NWY9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-371P-201ENST00000364283 108 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 SNORA63.7-201ENST00000365579 123 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 MT-TR-201ENST00000387439 65 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AL445529.1-201ENST00000398713 389 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AC063979.1-201ENST00000415539 377 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 USP9YP16-201ENST00000430287 407 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 USP9YP23-201ENST00000455085 407 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AC006517.1-201ENST00000480485 328 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 RPL29P14-201ENST00000495837 428 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AL442067.1-201ENST00000613261 223 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AC006065.5-201ENST00000623427 349 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 AL606534.2-204ENST00000635008 178 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 ZNF962P-201ENST00000443465 3140 ntBASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF40BQ6NWY9 DDX18P3-201ENST00000404856 2007 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC073346.2-201ENST00000624724 2058 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 MIR578-201ENST00000384828 96 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 MIR183-201ENST00000384958 110 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 SNORD73A-201ENST00000386062 65 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AL160275.2-201ENST00000412010 394 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 MRPS18CP6-201ENST00000423587 223 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 Z98949.2-201ENST00000440996 144 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC011816.1-201ENST00000441346 546 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AL451050.1-201ENST00000450126 415 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-143P-201ENST00000516942 93 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC025627.2-201ENST00000576220 160 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 HMGN2P28-201ENST00000606102 262 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AC012603.1-201ENST00000606424 528 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 MIR7702-201ENST00000621931 59 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 AL512643.1-201ENST00000635735 524 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 U6.105-201ENST00000637379 88 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 MAPK10-372ENST00000641954 3413 ntBASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PRPF40BQ6NWY9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40BQ6NWY9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40BQ6NWY9 RNU5A-1-201ENST00000362698 116 ntBASIC4.96□□□□□ -1.62
PRPF40BQ6NWY9 Y_RNA.485-201ENST00000384395 102 ntBASIC4.96□□□□□ -1.62
PRPF40BQ6NWY9 RNU6-933P-201ENST00000384424 107 ntBASIC4.96□□□□□ -1.62
PRPF40BQ6NWY9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms