Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNA5SP399-201ENST00000364003 117 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 RNU6-173P-201ENST00000364215 104 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.424-201ENST00000384063 103 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 MIR578-201ENST00000384828 96 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 MIR491-201ENST00000384877 84 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 MIR34B-201ENST00000385076 84 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 RNU6-1109P-201ENST00000391187 107 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 SNORA3.3-201ENST00000408712 125 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AL133396.1-201ENST00000432048 687 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 RPS23P3-201ENST00000470993 430 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 RPL17P19-201ENST00000489069 552 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 MTND3P25-201ENST00000509243 135 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 SNORA74D-201ENST00000516404 141 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 RNU4-77P-201ENST00000516692 156 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 SCARNA14-201ENST00000516903 136 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 Z98751.3-201ENST00000604447 521 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AL160281.1-201ENST00000605307 311 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 RMST_4.1-201ENST00000616886 107 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AC006065.5-201ENST00000623427 349 ntBASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USPL1Q5W0Q7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 CDC27P3-201ENST00000635418 1910 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 RNU6-1059P-201ENST00000363752 98 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 Y_RNA.577-201ENST00000384794 101 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 MIR183-201ENST00000384958 110 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 RNU6-823P-201ENST00000391042 103 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 RNU6-174P-201ENST00000410406 106 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 RN7SKP58-201ENST00000411010 305 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 MTCO1P39-201ENST00000426148 480 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AL451050.1-201ENST00000450126 415 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 RN7SL283P-201ENST00000489055 303 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 MIR1273C-201ENST00000578669 77 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 MIR3922-201ENST00000585192 84 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AC011373.1-201ENST00000607270 237 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AL021879.1-201ENST00000611756 288 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AC131238.1-201ENST00000617135 328 ntBASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.02□□□□□ -1.61
USPL1Q5W0Q7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 RNU6-1222P-201ENST00000384615 107 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AL030996.1-201ENST00000411430 235 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 FTH1P25-201ENST00000447665 469 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 RPL9P32-201ENST00000464118 620 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC018437.1-201ENST00000492214 406 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 RNU6-1315P-201ENST00000517187 99 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AC018889.1-201ENST00000605372 397 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 AL442067.1-201ENST00000613261 223 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 MAPK10-372ENST00000641954 3413 ntBASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USPL1Q5W0Q7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5□□□□□ -1.61
USPL1Q5W0Q7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5□□□□□ -1.61
USPL1Q5W0Q7 AC091812.1-201ENST00000432235 1948 ntBASIC5□□□□□ -1.61
USPL1Q5W0Q7 UBE2L2-201ENST00000254302 429 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms