Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC055731.1-201ENST00000474387 401 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 NCOR1P1-202ENST00000486162 291 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 UBL5P1-201ENST00000507979 193 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 SNORA14.1-201ENST00000516113 141 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AP005639.2-201ENST00000527592 928 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AP003476.1-201ENST00000623984 516 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AP003485.1-201ENST00000625093 753 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 ZNF29P-201ENST00000225587 168 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 SNORA3A-201ENST00000364113 130 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 RNU4-57P-201ENST00000515980 135 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 SNORA31.13-201ENST00000516624 135 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 RNU6-1073P-201ENST00000517182 106 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 HSBP1P1-201ENST00000555205 166 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 VN1R82P-201ENST00000601481 356 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 RNU6-600P-201ENST00000362524 99 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC246680.2-201ENST00000422106 389 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 RPL21P66-201ENST00000426566 466 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC004383.1-201ENST00000438135 289 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 RNA5SP57-201ENST00000459463 123 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC091435.1-201ENST00000505442 584 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 FAM206BP-201ENST00000510179 541 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 RNU6-567P-201ENST00000516746 107 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 DUSP12P1-201ENST00000612874 516 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 MIR676-201ENST00000390702 67 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC010301.1-201ENST00000473936 355 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 HMGN2P9-201ENST00000476875 229 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 CENPUP1-201ENST00000526649 1202 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC090616.3-201ENST00000582184 217 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AL355812.1-201ENST00000603215 216 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AL139344.1-201ENST00000605228 195 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 SNORD14A-201ENST00000606526 91 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC106800.4-201ENST00000614905 153 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AC027335.2-201ENST00000624030 375 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 AL391516.1-201ENST00000554380 2449 ntBASIC0.42□□□□□ -2.34
RIF1Q5UIP0 Y_RNA.146-201ENST00000363549 102 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 Y_RNA.293-201ENST00000364908 93 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 MRPL35P1-201ENST00000404272 572 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 UBE2FP1-201ENST00000416536 447 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC244453.4-201ENST00000419150 388 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 SFR1P2-201ENST00000421841 730 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 OR2A41P-201ENST00000473586 105 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 RPS27P22-201ENST00000478056 241 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 NUTF2P8-201ENST00000604593 363 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AP002784.2-201ENST00000397300 549 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 MRPL35P3-201ENST00000421557 364 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.41□□□□□ -2.34
RIF1Q5UIP0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC078899.2-201ENST00000595282 212 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AL592148.2-201ENST00000612210 372 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 AC020923.1-201ENST00000624021 917 ntBASIC0.41□□□□□ -2.34
RIF1Q5UIP0 SNORA38-201ENST00000363946 132 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 Y_RNA.204-201ENST00000364112 102 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 MIR153-1-201ENST00000384914 90 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.4□□□□□ -2.35
RIF1Q5UIP0 NF1P3-201ENST00000457709 450 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AC109927.2-201ENST00000506416 303 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AC112518.2-201ENST00000508565 425 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AC136932.1-201ENST00000574771 208 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AP001485.1-201ENST00000604799 199 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AL606495.1-201ENST00000422100 813 ntBASIC0.4□□□□□ -2.35
RIF1Q5UIP0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.4□□□□□ -2.35
RIF1Q5UIP0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.4□□□□□ -2.35
RIF1Q5UIP0 RPS27P23-201ENST00000487608 251 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms