Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.13□□□□□ -2.07
RFX4Q33E94 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RFX4Q33E94 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AL139824.2-201ENST00000458731 1095 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 RPL30P6-201ENST00000475925 342 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 RN7SL432P-201ENST00000484057 298 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AC114786.4-201ENST00000508771 728 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 RPS15AP11-201ENST00000594193 385 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AL358072.1-201ENST00000604156 575 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AC027807.2-201ENST00000616099 408 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AC092140.2-201ENST00000618027 521 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.13□□□□□ -2.07
RFX4Q33E94 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 MIR7515-201ENST00000637837 67 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AC092104.1-201ENST00000497346 1441 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RFX4Q33E94 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RFX4Q33E94 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX4Q33E94 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
RFX4Q33E94 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX4Q33E94 UBE2L2-201ENST00000254302 429 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RFX4Q33E94 RNU6-778P-201ENST00000363269 103 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 Y_RNA.560-201ENST00000384689 102 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 Y_RNA.608-201ENST00000410647 95 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 RNU4-72P-201ENST00000410754 173 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 ELOCP17-201ENST00000414751 326 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX4Q33E94 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 ISCA1P1-201ENST00000426679 387 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX4Q33E94 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX4Q33E94 MTND5P25-201ENST00000430499 799 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 RPL7P34-201ENST00000433316 712 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 RPL22P17-201ENST00000438729 315 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX4Q33E94 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX4Q33E94 AC108938.1-201ENST00000451204 136 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX4Q33E94 KATNBL1P6-201ENST00000453433 915 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AL139109.1-201ENST00000455491 297 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 BZW1P2-201ENST00000473537 826 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX4Q33E94 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 RPS27AP10-201ENST00000496103 208 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC112204.1-201ENST00000502591 103 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX4Q33E94 RNA5SP165-201ENST00000517142 115 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AP003181.2-201ENST00000528941 181 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AP003122.4-201ENST00000530980 758 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX4Q33E94 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX4Q33E94 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX4Q33E94 ROCK1P1-201ENST00000573767 549 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX4Q33E94 AC007363.1-201ENST00000604736 620 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC026790.2-201ENST00000606282 430 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC006338.1-201ENST00000618453 749 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 AC010149.2-201ENST00000637608 315 ntBASIC2.12□□□□□ -2.07
RFX4Q33E94 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 RNU4-1-201ENST00000363925 141 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 SMIM11P1-201ENST00000369586 178 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 MIR524-201ENST00000385242 87 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX4Q33E94 RNU2-49P-201ENST00000410666 184 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX4Q33E94 RPL17P12-201ENST00000413391 526 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AL445567.1-201ENST00000439121 144 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 PGBD4P3-201ENST00000440731 581 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 IPO7P1-201ENST00000442031 636 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 RPL26P9-201ENST00000457466 433 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AP000797.1-201ENST00000478870 387 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AC004924.1-201ENST00000480160 781 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX4Q33E94 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX4Q33E94 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.11□□□□□ -2.07
RFX4Q33E94 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
RFX4Q33E94 AC022634.1-201ENST00000520765 532 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.11□□□□□ -2.07
RFX4Q33E94 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX4Q33E94 AL158211.1-201ENST00000566763 763 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AC109446.2-201ENST00000567872 497 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX4Q33E94 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AL355877.2-201ENST00000603670 358 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AC008498.1-201ENST00000613012 531 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 MIR6817-201ENST00000615588 66 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 AC099654.13-201ENST00000639774 207 ntBASIC2.11□□□□□ -2.07
RFX4Q33E94 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFX4Q33E94 MTND5P29-201ENST00000458676 1807 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms