Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 RNA5SP154-201ENST00000516193 111 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 RNU6-277P-201ENST00000516272 106 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 AC009812.2-201ENST00000517657 457 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 AC087241.2-201ENST00000535801 324 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS72Q15906 MTCO3P13-201ENST00000577757 781 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS72Q15906 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS72Q15906 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.3□□□□□ -1.72
VPS72Q15906 AC008638.3-201ENST00000603341 463 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 AC008962.1-201ENST00000605729 304 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 AC002076.2-201ENST00000617362 122 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS72Q15906 AC008568.2-201ENST00000623862 2313 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VPS72Q15906 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS72Q15906 AC002546.1-201ENST00000588041 2504 ntBASIC4.3□□□□□ -1.72
VPS72Q15906 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS72Q15906 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.3□□□□□ -1.72
VPS72Q15906 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
VPS72Q15906 MTND4P35-201ENST00000604257 1375 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS72Q15906 ASNSP3-201ENST00000451989 1306 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS72Q15906 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 Y_RNA.22-201ENST00000362492 102 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RNU1-70P-201ENST00000362618 164 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RNU6-328P-201ENST00000390887 106 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RNU6-754P-201ENST00000391166 107 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS72Q15906 RN7SKP220-201ENST00000410611 288 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RNU2-62P-201ENST00000410868 191 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 MTND3P8-201ENST00000412909 339 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 EEF1A1P41-201ENST00000414667 207 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 IFNA20P-201ENST00000436840 528 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AL135938.1-201ENST00000443141 297 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RNA5SP310-201ENST00000459084 116 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 GMFBP1-201ENST00000467831 427 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RPS29P26-201ENST00000477483 171 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AC135721.1-201ENST00000497954 479 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AC025445.1-201ENST00000502728 300 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 YWHAEP4-201ENST00000505390 198 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS72Q15906 SNORD27.1-201ENST00000516319 72 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 RNU6-1314P-201ENST00000517139 104 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 OR5BN1P-201ENST00000532955 829 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS72Q15906 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS72Q15906 MIR4319-201ENST00000577285 85 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 MIR4435-1-201ENST00000582552 80 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AC022432.1-201ENST00000595739 310 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AL121992.2-201ENST00000606262 256 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AC103710.2-201ENST00000609912 942 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 U6.98-201ENST00000637157 84 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS72Q15906 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS72Q15906 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VPS72Q15906 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS72Q15906 CUL1P1-201ENST00000509510 2425 ntBASIC4.29□□□□□ -1.72
VPS72Q15906 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC090740.1-201ENST00000623193 2262 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 SNORA23-201ENST00000365128 182 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 RNU6-692P-201ENST00000384496 107 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 SNORD37.1-201ENST00000390968 65 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 TXNP7-201ENST00000406296 293 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 AC018630.2-202ENST00000422992 927 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS72Q15906 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC108938.1-201ENST00000451204 136 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC108059.3-201ENST00000456388 214 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 Y_RNA.638-201ENST00000459374 113 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 HMGN2P26-201ENST00000463169 339 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 RN7SKP132-201ENST00000516001 208 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 SNORA19.2-201ENST00000516013 114 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 RNA5SP367-201ENST00000516557 118 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 SCOCP1-201ENST00000554676 349 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 AC091544.4-201ENST00000555268 342 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC005668.1-201ENST00000571142 476 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS72Q15906 AF038458.1-201ENST00000588406 262 ntBASIC4.28□□□□□ -1.72
VPS72Q15906 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS72Q15906 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS72Q15906 AC068831.7-201ENST00000616954 363 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms